Mercurial > repos > bebatut > format_metaphlan2_output

annotate test-data/all_taxo_level_abundance.txt @ 2:370b56f8a02d draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/format_metaphlan2_output/ commit eea46077010e699403ce6995d7d4aac77b2e0b43"
author bgruening
date Wed, 19 Oct 2022 14:39:16 +0000
parents 2bfa9b200600
children
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0
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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1 kingdom phylum class order family genus species strains abundance
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
2 Bacteria 99.20573
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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3 Archaea 0.79427
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
4 Bacteria Deinococcus Thermus 45.20297
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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5 Bacteria Firmicutes 19.15406
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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6 Bacteria Proteobacteria 16.57369
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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7 Bacteria Actinobacteria 10.37863
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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8 Bacteria Bacteroidetes 7.89639
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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9 Archaea Euryarchaeota 0.79427
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
10 Bacteria Deinococcus Thermus Deinococci 45.20297
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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11 Bacteria Firmicutes Bacilli 17.33469
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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12 Bacteria Actinobacteria Actinobacteria 10.37863
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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13 Bacteria Proteobacteria Gammaproteobacteria 8.28554
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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14 Bacteria Bacteroidetes Bacteroidia 7.89639
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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15 Bacteria Proteobacteria Epsilonproteobacteria 4.03024
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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16 Bacteria Proteobacteria Betaproteobacteria 3.73739
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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17 Bacteria Firmicutes Clostridia 1.81937
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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18 Archaea Euryarchaeota Methanobacteria 0.79427
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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19 Bacteria Proteobacteria Alphaproteobacteria 0.52051
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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20 Bacteria Deinococcus Thermus Deinococci Deinococcales 45.20297
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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21 Bacteria Actinobacteria Actinobacteria Actinomycetales 10.37863
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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22 Bacteria Firmicutes Bacilli Bacillales 9.19153
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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23 Bacteria Firmicutes Bacilli Lactobacillales 8.14315
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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24 Bacteria Bacteroidetes Bacteroidia Bacteroidales 7.89639
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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25 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales 6.58945
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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26 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales 4.03024
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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27 Bacteria Proteobacteria Betaproteobacteria Neisseriales 3.73739
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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28 Bacteria Firmicutes Clostridia Clostridiales 1.81937
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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29 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales 1.6961
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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diff changeset
30 Archaea Euryarchaeota Methanobacteria Methanobacteriales 0.79427
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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31 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales 0.52051
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
32 Bacteria Deinococcus Thermus Deinococci Deinococcales Deinococcaceae 45.20297
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
33 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae 7.89639
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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34 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae 7.4516
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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35 Bacteria Actinobacteria Actinobacteria Actinomycetales Propionibacteriaceae 6.71696
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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36 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae 6.43313
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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37 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae 5.88648
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
38 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae 4.03024
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
39 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae 3.73739
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
40 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae 3.66166
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
41 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae 1.81937
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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42 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae 1.71002
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
43 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae 1.6961
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
44 Bacteria Firmicutes Bacilli Bacillales Listeriaceae 1.58307
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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diff changeset
45 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae 0.79427
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
46 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae 0.70297
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
47 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 0.52051
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
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diff changeset
48 Bacteria Firmicutes Bacilli Bacillales Bacillaceae 0.15687
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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49 Bacteria Deinococcus Thermus Deinococci Deinococcales Deinococcaceae Deinococcus 45.20297
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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50 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.89639
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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51 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus 7.4516
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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52 Bacteria Actinobacteria Actinobacteria Actinomycetales Propionibacteriaceae Propionibacterium 6.71696
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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53 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus 6.43313
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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54 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter 5.88648
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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55 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter 4.03024
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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56 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria 3.73739
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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57 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces 3.66166
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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58 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium 1.81937
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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59 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus 1.71002
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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60 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia 1.6961
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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61 Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria 1.58307
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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62 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter 0.79427
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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63 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas 0.70297
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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64 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rhodobacter 0.52051
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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65 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus 0.15687
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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66 Bacteria Deinococcus Thermus Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiodurans 45.20297
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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67 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides vulgatus 7.89639
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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68 Bacteria Actinobacteria Actinobacteria Actinomycetales Propionibacteriaceae Propionibacterium Propionibacterium acnes 6.71696
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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69 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter baumannii 5.88648
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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70 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus epidermidis 4.54517
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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71 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori 4.03024
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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72 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis oralis pneumoniae 4.02995
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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73 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria meningitidis 3.73739
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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74 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces Actinomyces odontolyticus 3.66166
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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75 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus 2.90642
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
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diff changeset
76 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mutans 2.35195
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
77 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium beijerinckii 1.81937
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
78 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecalis 1.71002
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
79 Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria monocytogenes 1.58307
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
80 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia Escherichia coli 0.89751
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
81 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia Escherichia unclassified 0.79859
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
82 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas unclassified 0.55542
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
83 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii 0.55066
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
84 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rhodobacter Rhodobacter sphaeroides 0.52051
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
85 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter unclassified 0.24361
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
86 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus cereus thuringiensis 0.15687
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
87 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa 0.14755
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
88 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus agalactiae 0.05124
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
89 Bacteria Deinococcus Thermus Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiodurans GCF 000008565 45.20297
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
90 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides vulgatus GCF 000012825 7.89639
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
91 Bacteria Actinobacteria Actinobacteria Actinomycetales Propionibacteriaceae Propionibacterium Propionibacterium acnes Propionibacterium acnes unclassified 6.71696
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
92 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter baumannii Acinetobacter baumannii unclassified 5.88648
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
93 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus epidermidis Staphylococcus epidermidis unclassified 4.54517
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
94 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori Helicobacter pylori unclassified 4.03024
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
95 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis oralis pneumoniae Streptococcus mitis oralis pneumoniae unclassified 4.02995
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
96 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria meningitidis Neisseria meningitidis unclassified 3.73739
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
97 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces Actinomyces odontolyticus Actinomyces odontolyticus unclassified 3.66166
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
98 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus Staphylococcus aureus unclassified 2.90642
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
99 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mutans Streptococcus mutans unclassified 2.35195
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
100 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium beijerinckii Clostridium beijerinckii unclassified 1.81937
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
101 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecalis Enterococcus faecalis unclassified 1.71002
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
102 Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria monocytogenes Listeria monocytogenes unclassified 1.58307
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
103 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia Escherichia coli Escherichia coli unclassified 0.89751
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
104 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii Methanobrevibacter smithii unclassified 0.55066
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
105 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rhodobacter Rhodobacter sphaeroides Rhodobacter sphaeroides unclassified 0.52051
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
106 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus cereus thuringiensis Bacillus cereus thuringiensis unclassified 0.15687
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
107 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa Pseudomonas aeruginosa unclassified 0.14755
2bfa9b200600 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
bebatut
parents:
diff changeset
108 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus agalactiae Streptococcus agalactiae unclassified 0.05124