Mercurial > repos > bebatut > humann2

comparison tool-data/metaphlan2_db.loc.sample @ 1:bcd414bb721b draft default tip

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 79571d981d7d56657699be8aa24a40a36a8d0ab5-dirty
author bebatut
date Thu, 02 Jun 2016 04:23:09 -0400
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0:3d6f37e7e3a8 1:bcd414bb721b
1 # Bowtie2 db have to be downloaded from https://bitbucket.org/biobakery/metaphlan2/src/5424bb911dfc/db_v20/?at=default (whole directory)
2 #
3 #Since MetaPhlAn comes bundled with 1 Bowtie2 database, you can use it
4 #by downloading it as explained above and uncommenting the following lines.
5 #mpa_v20_m200 Defaut database with clade-specific marker genes $METAPHLAN2_DIR/db_v20/mpa_v20_m200