Mercurial > repos > bebatut > package_goatools_0_6_4

changeset 0:25b614b3491f draft default tip

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/packages/package_goatools_0_6_4 commit 3b6cd185b0171965c47f659a182843aa330a8e5a-dirty
author bebatut
date Fri, 27 May 2016 05:28:51 -0400
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 57 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri May 27 05:28:51 2016 -0400
@@ -0,0 +1,57 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="python" version="2.7.10">
+        <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="fisher" version="0.1.4">
+        <repository changeset_revision="07479e0cbc5f" name="package_python_2_7_fisher_0_1_4" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="statsmodels" version="0.6.1">
+        <repository changeset_revision="ae7f41481998" name="package_python_2_7_statsmodels_0_6_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="xlsxwriter" version="0.8.5">
+        <repository changeset_revision="4133d7fe41e1" name="package_python_2_7_xlsxwriter_0_8_5" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="wget" version="3.2">
+        <repository changeset_revision="c7aaab8b0202" name="package_python_2_7_wget_3_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="goatools" version="0.6.4">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://github.com/tanghaibao/goatools/archive/v0.6.4.zip</action>
+                <action type="move_directory_files">
+                    <source_directory>.</source_directory>
+                    <destination_directory>$INSTALL_DIR/</destination_directory>
+                </action>
+
+                <action type="setup_python_environment">
+                    <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                       <package name="python" version="2.7.10" />
+                    </repository>
+                    <repository changeset_revision="07479e0cbc5f" name="package_python_2_7_fisher_0_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="fisher" version="0.1.4" />
+                    </repository>
+                    <repository changeset_revision="ae7f41481998" name="package_python_2_7_statsmodels_0_6_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="statsmodels" version="0.6.1" />
+                    </repository>
+                    <repository changeset_revision="4133d7fe41e1" name="package_python_2_7_xlsxwriter_0_8_5" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="xlsxwriter" version="0.8.5" />
+                    </repository>
+                    <repository changeset_revision="c7aaab8b0202" name="package_python_2_7_wget_3_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <package name="wget" version="3.2" />
+                    </repository>
+
+                    <package md5sum="0f0b5ff462b3b965ba38c44830652ea0">https://pypi.python.org/packages/source/g/goatools/goatools-0.6.4.tar.gz</package>
+                </action>
+
+                <action type="set_environment">
+                    <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
+                    <environment_variable action="set_to" name="PYTHONPATH_GOATOOLS">$INSTALL_DIR</environment_variable>
+                    <environment_variable action="set_to" name="GOATOOLS_ROOT_PATH">$INSTALL_DIR</environment_variable>
+                    <environment_variable action="set_to" name="GOATOOLS_DIR">$INSTALL_DIR/</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme />
+    </package>
+</tool_dependency>