view test-data/annotation_unique.gtf @ 6:d6ede73082da draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/agat commit df456b8d319fd0a629829fba0f5819117b7936d3
author bgruening
date Fri, 18 Oct 2024 13:34:42 +0000
parents f7c0a0030254
children
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##gtf-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM301845v1
#!genome-build-accession NCBI_Assembly:GCF_003018455.1
#!annotation-date 05/25/2022 04:54:31
#!annotation-source NCBI RefSeq 
##sequence-region NZ_CP027599.1 1 5942969
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=562
NZ_CP027599.1	RefSeq	gene	11598	12935	.	+	.	gene_id "nbis-gene-12"; ID "nbis-gene-12"; Name "dgoT"; gbkey "Gene"; gene "dgoT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00060";
NZ_CP027599.1	RefSeq	transcript	11598	12935	.	+	.	gene_id "nbis-gene-12"; transcript_id "gene-C7A06_RS00060"; ID "gene-C7A06_RS00060"; Name "dgoT"; Parent "nbis-gene-12"; gbkey "Gene"; gene "dgoT"; gene_biotype "protein_coding"; locus_tag "C7A06_RS00060"; original_biotype "mrna";
NZ_CP027599.1	Protein Homology	exon	11598	12935	.	+	.	gene_id "nbis-gene-12"; transcript_id "gene-C7A06_RS00060"; Dbxref "Genbank:WP_000253455.1"; ID "nbis-exon-12"; Name "WP_000253455.1"; Parent "gene-C7A06_RS00060"; gbkey "CDS"; gene "dgoT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709507.1"; locus_tag "C7A06_RS00060"; product "MFS transporter"; protein_id "WP_000253455.1"; transl_table "11";
NZ_CP027599.1	Protein Homology	CDS	11598	12935	.	+	0	gene_id "nbis-gene-12"; transcript_id "gene-C7A06_RS00060"; Dbxref "Genbank:WP_000253455.1"; ID "cds-WP_000253455.1"; Name "WP_000253455.1"; Parent "gene-C7A06_RS00060"; gbkey "CDS"; gene "dgoT"; inference "COORDINATES: similar to AA sequence:RefSeq:NP_709507.1"; locus_tag "C7A06_RS00060"; product "MFS transporter"; protein_id "WP_000253455.1"; transl_table "11";