Mercurial > repos > bgruening > alevin

view test-data/cached_locally/prebuilt_index/quasi_index.log @ 3:0a5258e41227 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/salmon commit cf916eb507ee224812b64663c1d6020eb59eb88c"
author bgruening
date Thu, 17 Oct 2019 17:05:18 -0400
parents 908a8d400fa2
children
line wrap: on
line source

[2019-09-08 20:35:10.409] [jointLog] [info] [Step 1 of 4] : counting k-mers
[2019-09-08 20:35:10.412] [jointLog] [info] Replaced 0 non-ATCG nucleotides
[2019-09-08 20:35:10.412] [jointLog] [info] Clipped poly-A tails from 0 transcripts
[2019-09-08 20:35:10.412] [jointLog] [info] Building rank-select dictionary and saving to disk
[2019-09-08 20:35:10.412] [jointLog] [info] done
[2019-09-08 20:35:10.412] [jointLog] [info] Writing sequence data to file . . . 
[2019-09-08 20:35:10.412] [jointLog] [info] done
[2019-09-08 20:35:10.412] [jointLog] [info] Building 32-bit suffix array (length of generalized text is 28,577)
[2019-09-08 20:35:10.413] [jointLog] [info] Building suffix array . . . 
[2019-09-08 20:35:10.445] [jointLog] [info] khash had 18,902 keys
[2019-09-08 20:35:10.445] [jointLog] [info] saving hash to disk . . . 
[2019-09-08 20:35:10.447] [jointLog] [info] done