comparison augustus_training.xml @ 6:dc027fa56d55 draft default tip

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/augustus commit a5c4068d1515fc946d1ee7caf66cc59c9938a124"

5:7be22100e5e1

<?xml version="1.0"?>
<tool id="augustus_training" name="Train Augustus" profile="16.04" version="@VERSION@">
    <description>ab-initio gene predictor</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements">
        <requirement type="package" version="2.31.10">maker</requirement>
    </expand>
    <command><![CDATA[
        cp -r `which augustus | xargs dirname`/../config/ augustus_dir/ &&

        export AUGUSTUS_CONFIG_PATH=`pwd`/augustus_dir/ &&

        maker2zff '${maker_gff}' &&

6:dc027fa56d55

<?xml version="1.0"?>
<tool id="augustus_training" name="Train Augustus" profile="16.04" version="@VERSION@+galaxy@SUFFIX_VERSION@">
    <description>ab-initio gene predictor</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <expand macro="requirements">
        <requirement type="package" version="2.31.10">maker</requirement>
    </expand>
    <command><![CDATA[
        cp -r `command -v augustus | xargs dirname`/../config/ augustus_dir/ &&

        export AUGUSTUS_CONFIG_PATH=`pwd`/augustus_dir/ &&

        maker2zff '${maker_gff}' &&