Mercurial > repos > bgruening > bismark
comparison bismark_bowtie2_wrapper.xml @ 6:0f8646f22b8d draft
Uploaded
| author | bgruening |
|---|---|
| date | Wed, 11 Feb 2015 16:21:51 -0500 |
| parents | b100248c35b8 |
| children |
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| 5:b100248c35b8 | 6:0f8646f22b8d |
|---|---|
| 18 bismark_wrapper.py | 18 bismark_wrapper.py |
| 19 | 19 |
| 20 ## Change this to accommodate the number of threads you have available. | 20 ## Change this to accommodate the number of threads you have available. |
| 21 --num-threads "\${GALAXY_SLOTS:-24}" | 21 --num-threads "\${GALAXY_SLOTS:-24}" |
| 22 | 22 |
| 23 ##--bismark_path \$SCRIPT_PATH | 23 --bismark_path \$SCRIPT_PATH |
| 24 | 24 |
| 25 --bowtie2 | 25 --bowtie2 |
| 26 | 26 |
| 27 ## | 27 ## |
| 28 ## Bismark Genome Preparation, if desired. | 28 ## Bismark Genome Preparation, if desired. |