Mercurial > repos > bgruening > bismark
comparison bismark_methylation_extractor.xml @ 6:0f8646f22b8d draft
Uploaded
| author | bgruening |
|---|---|
| date | Wed, 11 Feb 2015 16:21:51 -0500 |
| parents | b100248c35b8 |
| children |
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| 5:b100248c35b8 | 6:0f8646f22b8d |
|---|---|
| 12 <![CDATA[ | 12 <![CDATA[ |
| 13 bismark_methylation_extractor.py | 13 bismark_methylation_extractor.py |
| 14 | 14 |
| 15 --infile $input | 15 --infile $input |
| 16 | 16 |
| 17 #--bismark_path \$SCRIPT_PATH | 17 --bismark_path \$SCRIPT_PATH |
| 18 | 18 |
| 19 #if $singlePaired.sPaired == "single": | 19 #if $singlePaired.sPaired == "single": |
| 20 --single-end | 20 --single-end |
| 21 #else: | 21 #else: |
| 22 --paired-end | 22 --paired-end |