diff test-data/output_mbias_report.txt @ 8:9bfe38410155 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bismark commit 51299fa62f0566a4a897b1c149db564631282fff

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/output_mbias_report.txt	Wed Aug 22 08:09:42 2018 -0400
@@ -0,0 +1,267 @@
+CpG context
+===========
+position	count methylated	count unmethylated	% methylation	coverage
+1	9	3	75.00	12
+2	4	1	80.00	5
+3	7	2	77.78	9
+4	5	2	71.43	7
+5	3	1	75.00	4
+6	2	2	50.00	4
+7	5	4	55.56	9
+8	7	1	87.50	8
+9	3	2	60.00	5
+10	2	0	100.00	2
+11	4	1	80.00	5
+12	4	2	66.67	6
+13	1	1	50.00	2
+14	4	0	100.00	4
+15	3	1	75.00	4
+16	2	1	66.67	3
+17	3	2	60.00	5
+18	5	3	62.50	8
+19	4	1	80.00	5
+20	2	1	66.67	3
+21	1	3	25.00	4
+22	1	2	33.33	3
+23	1	1	50.00	2
+24	5	0	100.00	5
+25	3	0	100.00	3
+26	4	2	66.67	6
+27	3	2	60.00	5
+28	2	1	66.67	3
+29	6	2	75.00	8
+30	3	1	75.00	4
+31	1	0	100.00	1
+32	3	1	75.00	4
+33	4	2	66.67	6
+34	3	1	75.00	4
+35	2	1	66.67	3
+36	2	3	40.00	5
+37	7	4	63.64	11
+38	4	1	80.00	5
+39	4	1	80.00	5
+40	4	5	44.44	9
+41	5	4	55.56	9
+42	5	2	71.43	7
+43	1	3	25.00	4
+44	0	1	0.00	1
+45	4	1	80.00	5
+46	5	0	100.00	5
+47	3	2	60.00	5
+48	1	1	50.00	2
+49	2	2	50.00	4
+50	3	2	60.00	5
+51	2	4	33.33	6
+52	1	0	100.00	1
+53	2	1	66.67	3
+54	1	0	100.00	1
+55	3	0	100.00	3
+56	1	1	50.00	2
+57	2	0	100.00	2
+58	0	1	0.00	1
+59	4	3	57.14	7
+60	4	4	50.00	8
+61	0	1	0.00	1
+62	4	6	40.00	10
+63	4	0	100.00	4
+64	2	1	66.67	3
+65	0	0		0
+66	3	1	75.00	4
+67	2	0	100.00	2
+68	2	1	66.67	3
+69	4	0	100.00	4
+70	3	2	60.00	5
+71	3	2	60.00	5
+72	3	1	75.00	4
+73	3	0	100.00	3
+74	7	4	63.64	11
+75	3	1	75.00	4
+76	1	0	100.00	1
+77	1	3	25.00	4
+78	0	1	0.00	1
+79	0	3	0.00	3
+80	1	3	25.00	4
+81	1	1	50.00	2
+82	0	2	0.00	2
+83	3	2	60.00	5
+84	3	1	75.00	4
+85	1	1	50.00	2
+
+CHG context
+===========
+position	count methylated	count unmethylated	% methylation	coverage
+1	10	21	32.26	31
+2	11	24	31.43	35
+3	5	20	20.00	25
+4	2	10	16.67	12
+5	1	13	7.14	14
+6	0	17	0.00	17
+7	0	27	0.00	27
+8	0	22	0.00	22
+9	0	22	0.00	22
+10	0	26	0.00	26
+11	0	22	0.00	22
+12	1	13	7.14	14
+13	0	14	0.00	14
+14	1	23	4.17	24
+15	0	30	0.00	30
+16	0	17	0.00	17
+17	0	24	0.00	24
+18	0	23	0.00	23
+19	0	14	0.00	14
+20	0	26	0.00	26
+21	0	23	0.00	23
+22	0	25	0.00	25
+23	0	22	0.00	22
+24	0	18	0.00	18
+25	0	20	0.00	20
+26	0	17	0.00	17
+27	2	24	7.69	26
+28	0	22	0.00	22
+29	0	24	0.00	24
+30	0	21	0.00	21
+31	0	21	0.00	21
+32	0	22	0.00	22
+33	0	25	0.00	25
+34	0	15	0.00	15
+35	1	29	3.33	30
+36	1	24	4.00	25
+37	0	30	0.00	30
+38	0	16	0.00	16
+39	0	27	0.00	27
+40	1	19	5.00	20
+41	2	22	8.33	24
+42	0	20	0.00	20
+43	0	20	0.00	20
+44	1	22	4.35	23
+45	0	25	0.00	25
+46	1	21	4.55	22
+47	1	32	3.03	33
+48	1	16	5.88	17
+49	2	26	7.14	28
+50	0	19	0.00	19
+51	0	18	0.00	18
+52	0	20	0.00	20
+53	1	34	2.86	35
+54	0	27	0.00	27
+55	0	24	0.00	24
+56	0	14	0.00	14
+57	0	19	0.00	19
+58	0	19	0.00	19
+59	0	21	0.00	21
+60	0	20	0.00	20
+61	0	25	0.00	25
+62	0	25	0.00	25
+63	0	29	0.00	29
+64	0	21	0.00	21
+65	0	26	0.00	26
+66	0	19	0.00	19
+67	0	20	0.00	20
+68	0	7	0.00	7
+69	1	15	6.25	16
+70	1	19	5.00	20
+71	1	17	5.56	18
+72	0	10	0.00	10
+73	0	22	0.00	22
+74	0	25	0.00	25
+75	0	14	0.00	14
+76	0	24	0.00	24
+77	0	18	0.00	18
+78	1	14	6.67	15
+79	0	16	0.00	16
+80	0	17	0.00	17
+81	0	12	0.00	12
+82	0	17	0.00	17
+83	1	17	5.56	18
+84	0	25	0.00	25
+85	1	17	5.56	18
+
+CHH context
+===========
+position	count methylated	count unmethylated	% methylation	coverage
+1	18	31	36.73	49
+2	5	25	16.67	30
+3	4	31	11.43	35
+4	3	28	9.68	31
+5	5	36	12.20	41
+6	3	43	6.52	46
+7	2	52	3.70	54
+8	1	62	1.59	63
+9	2	52	3.70	54
+10	1	57	1.72	58
+11	1	59	1.67	60
+12	0	70	0.00	70
+13	4	55	6.78	59
+14	0	68	0.00	68
+15	1	65	1.52	66
+16	1	74	1.33	75
+17	1	81	1.22	82
+18	1	71	1.39	72
+19	1	72	1.37	73
+20	1	78	1.27	79
+21	0	82	0.00	82
+22	1	69	1.43	70
+23	0	85	0.00	85
+24	1	94	1.05	95
+25	1	78	1.27	79
+26	1	89	1.11	90
+27	0	72	0.00	72
+28	0	84	0.00	84
+29	0	72	0.00	72
+30	1	61	1.61	62
+31	0	79	0.00	79
+32	0	88	0.00	88
+33	3	80	3.61	83
+34	1	85	1.16	86
+35	0	79	0.00	79
+36	2	68	2.86	70
+37	1	62	1.59	63
+38	0	77	0.00	77
+39	1	87	1.14	88
+40	1	77	1.28	78
+41	0	70	0.00	70
+42	2	69	2.82	71
+43	0	66	0.00	66
+44	2	76	2.56	78
+45	3	85	3.41	88
+46	2	69	2.82	71
+47	0	68	0.00	68
+48	0	81	0.00	81
+49	0	73	0.00	73
+50	0	79	0.00	79
+51	0	81	0.00	81
+52	1	65	1.52	66
+53	0	79	0.00	79
+54	3	90	3.23	93
+55	1	80	1.23	81
+56	1	82	1.20	83
+57	1	77	1.28	78
+58	0	71	0.00	71
+59	1	84	1.18	85
+60	1	95	1.04	96
+61	1	84	1.18	85
+62	0	95	0.00	95
+63	1	88	1.12	89
+64	0	89	0.00	89
+65	1	77	1.28	78
+66	3	89	3.26	92
+67	1	69	1.43	70
+68	2	98	2.00	100
+69	2	92	2.13	94
+70	0	94	0.00	94
+71	1	87	1.14	88
+72	1	83	1.19	84
+73	0	87	0.00	87
+74	2	74	2.63	76
+75	1	78	1.27	79
+76	0	74	0.00	74
+77	3	79	3.66	82
+78	1	71	1.39	72
+79	0	66	0.00	66
+80	0	71	0.00	71
+81	1	84	1.18	85
+82	0	88	0.00	88
+83	2	79	2.47	81
+84	2	81	2.41	83
+85	2	63	3.08	65
+