Mercurial > repos > bgruening > bismark
view test-data/output_splitting_report.txt @ 13:f211753166bd draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bismark commit b9780e368b2e46dc541a846519ccc9593226ee0d
author | bgruening |
---|---|
date | Tue, 30 Jul 2019 06:30:36 -0400 |
parents | 9bfe38410155 |
children | 8c191acde702 |
line wrap: on
line source
dataset_76c1988f-01b0-427e-9dbe-bfb5eee1c664.dat Parameters used to extract methylation information: Bismark Extractor Version: v0.22.1 Bismark result file: single-end (SAM format) Output specified: comprehensive Processed 554 lines in total Total number of methylation call strings processed: 554 Final Cytosine Methylation Report ================================= Total number of C's analysed: 8563 Total methylated C's in CpG context: 245 Total methylated C's in CHG context: 51 Total methylated C's in CHH context: 114 Total C to T conversions in CpG context: 133 Total C to T conversions in CHG context: 1762 Total C to T conversions in CHH context: 6258 C methylated in CpG context: 64.8% C methylated in CHG context: 2.8% C methylated in CHH context: 1.8%