# HG changeset patch
# User bgruening
# Date 1373119463 14400
# Node ID 9d02cd7883ad6100d5e0e8b956d55ee72541257b
# Parent  62c6da72dd4a586aa7f094cdcf1c4d140b849946
Uploaded

diff -r 62c6da72dd4a -r 9d02cd7883ad tool_dependencies.xml
--- a/tool_dependencies.xml	Sat Jul 06 09:57:36 2013 -0400
+++ b/tool_dependencies.xml	Sat Jul 06 10:04:23 2013 -0400
@@ -1,10 +1,10 @@
 <?xml version="1.0"?>
-<package name="samtools" version="0.1.18">
-    <repository toolshed="http://testtoolshed.g2.bx.psu.edu/" name="package_samtools_0_1_18" owner="devteam " changeset_revision="a7936f4ea405" />
-</package>
 <tool_dependency>
+    <package name="samtools" version="0.1.18">
+        <repository changeset_revision="a7936f4ea405" name="package_samtools_0_1_18" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
+    </package>
     <set_environment version="1.0">
-        <environment_variable name="SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
+        <environment_variable action="set_to" name="SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
     </set_environment>
     <package name="bowtie2" version="2.1.0">
         <install version="1.0">
@@ -25,7 +25,7 @@
                 </action>
                 <action type="shell_command">chmod +x $INSTALL_DIR/bin/bowtie2</action>
                 <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                 </action>
             </actions>
         </install>
@@ -51,7 +51,7 @@
                     <destination>$INSTALL_DIR/bin</destination>
                 </action>
                 <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                 </action>
             </actions>
         </install>
@@ -59,6 +59,3 @@
         </readme>
     </package>
 </tool_dependency>
-
-
-