Mercurial > repos > bgruening > blobtoolkit
comparison macros.xml @ 3:8c2167481e72 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/blobtoolkit commit d4e8bcb01de330e345970d3df6b75392c7fe2275
author | bgruening |
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date | Fri, 26 Jul 2024 16:15:35 +0000 |
parents | 53dd00a4ab68 |
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2:53dd00a4ab68 | 3:8c2167481e72 |
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1 <macros> | 1 <macros> |
2 <token name="@TOOL_VERSION@">4.0.7</token> | 2 <token name="@TOOL_VERSION@">4.0.7</token> |
3 <token name="@VERSION_SUFFIX@">1</token> | 3 <token name="@VERSION_SUFFIX@">2</token> |
4 | 4 |
5 <xml name="requirements"> | 5 <xml name="requirements"> |
6 <requirements> | 6 <requirements> |
7 <container type="docker">genomehubs/blobtoolkit:@TOOL_VERSION@</container> | 7 <container type="docker">quay.io/biocontainers/blobtoolkit:4.3.11</container> |
8 </requirements> | 8 </requirements> |
9 </xml> | 9 </xml> |
10 <xml name="citations"> | 10 <xml name="citations"> |
11 <citations> | 11 <citations> |
12 <citation type="doi">10.1534/g3.119.400908</citation> | 12 <citation type="doi">10.1534/g3.119.400908</citation> |
44 </conditional> | 44 </conditional> |
45 </xml> | 45 </xml> |
46 <xml name="macro_taxdump"> | 46 <xml name="macro_taxdump"> |
47 <param argument="--taxdump" type="data" format="tar,gz,tgz" label="NCBI taxdump directory" help="It requires to use the last taxdump version. You can find more information about it in the help section."/> | 47 <param argument="--taxdump" type="data" format="tar,gz,tgz" label="NCBI taxdump directory" help="It requires to use the last taxdump version. You can find more information about it in the help section."/> |
48 </xml> | 48 </xml> |
49 <xml name="blobtk_plotting"> | |
50 <conditional name="blobtk_plot_options"> | |
51 <param name="blobtk_plot" type="select" label="Do you want to plot the dataset"> | |
52 <option value="yes">Yes</option> | |
53 <option value="no">No</option> | |
54 </param> | |
55 <when value="yes"> | |
56 <param name="plot_view" type="select" label="Select the view type for the plot"> | |
57 <option value="blob" selected="true">Blob view</option> | |
58 <option value="cumulative">Cumulative view</option> | |
59 <option value="legend">Legend view</option> | |
60 <option value="snail">Snail view</option> | |
61 </param> | |
62 </when> | |
63 <when value="no"></when> | |
64 </conditional> | |
65 </xml> | |
49 </macros> | 66 </macros> |