Mercurial > repos > bgruening > blobtoolkit
diff macros.xml @ 0:7d9ee8cd14b8 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/blobtoolkit commit 7c0db48ffd4dbee68fb2320fc5a064bc9c3219d9
author | bgruening |
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date | Mon, 30 Jan 2023 12:39:40 +0000 |
parents | |
children | 840822c1e84a |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros.xml Mon Jan 30 12:39:40 2023 +0000 @@ -0,0 +1,47 @@ +<macros> + <token name="@TOOL_VERSION@">3.4.0</token> + <token name="@VERSION_SUFFIX@">0</token> + + <xml name="requirements"> + <requirements> + <container type="docker">genomehubs/blobtoolkit:@TOOL_VERSION@</container> + </requirements> + </xml> + <xml name="citations"> + <citations> + <citation type="doi">10.1534/g3.119.400908</citation> + </citations> + </xml> + <xml name="macro_text_input" > + <conditional name="text_input"> + <param name="selector" type="select" label="Genetic text file" help="Include a genetic text file as input"> + <option value="enabled">Enabled</option> + <option value="disabled" selected="true">Disabled</option> + </param> + <when value="enabled"> + <param argument="--text" type="data" format="txt" label="Generic text file"/> + <param argument="--text-cols" type="text" value="" label="Column specification" help="Example: 1=identifiers,2,3=score,total=total_score"> + <sanitizer invalid_char=""> + <valid initial="string.letters,string.digits"> + <add value="_" /> + <add value="," /> + <add value="=" /> + <add value="-" /> + <add value="#" /> + </valid> + </sanitizer> + <validator type="regex">[0-9a-zA-Z=,_#-]+</validator> + </param> + <param argument="--text-header" type="boolean" truevalue="--text-header" falsevalue="" checked="false" label="Text has header row" help="Set the flag if a text file contains a header row" /> + <param argument="--text-delimiter" type="select" label="Text delimiter" help="Character used as delimiter in the text file"> + <option value=",">Comma</option> + <option value="\t">Tabulation</option> + <option value="whitespace">Whitespace</option> + </param> + <yield/> + </when> + <when value="disabled"/> + </conditional> + + </xml> +</macros> \ No newline at end of file