Mercurial > repos > bgruening > chemical_data_sources
comparison get_online_data/get_online_data.py @ 5:c2055dd1927b draft default tip
Uploaded
| author | bgruening |
|---|---|
| date | Thu, 24 Apr 2014 13:19:33 -0400 |
| parents | f653fd06f055 |
| children |
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| 4:7c1f9962ac07 | 5:c2055dd1927b |
|---|---|
| 35 out = open(sys.argv[2], 'wb') | 35 out = open(sys.argv[2], 'wb') |
| 36 | 36 |
| 37 if len(sys.argv) > 3: | 37 if len(sys.argv) > 3: |
| 38 allowed_extensions = [ ext.strip() for ext in unescape(sys.argv[3]).split('\n') ] | 38 allowed_extensions = [ ext.strip() for ext in unescape(sys.argv[3]).split('\n') ] |
| 39 else: | 39 else: |
| 40 allowed_extensions = ['.sdf', '.smi', '.inchi'] | 40 allowed_extensions = ['.sdf', '.smi', '.inchi', '.mol'] |
| 41 | 41 |
| 42 for url in urls.split('\n'): | 42 for url in urls.split('\n'): |
| 43 url = url.strip() | 43 url = url.strip() |
| 44 request = urllib2.Request( url ) | 44 request = urllib2.Request( url ) |
| 45 request.add_header('Accept-encoding', 'gzip') | 45 request.add_header('Accept-encoding', 'gzip') |