Mercurial > repos > bgruening > chemical_data_sources
diff get_pubchem/get_pubchem_as_smiles.py @ 4:7c1f9962ac07 draft
Add temporary hack until my galaxy stdout/stderr UTF-8 bug is fixed.
author | bgruening |
---|---|
date | Fri, 27 Sep 2013 15:51:46 -0400 |
parents | 021f0ef9474f |
children |
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--- a/get_pubchem/get_pubchem_as_smiles.py Wed Sep 18 09:44:36 2013 -0400 +++ b/get_pubchem/get_pubchem_as_smiles.py Fri Sep 27 15:51:46 2013 -0400 @@ -29,7 +29,7 @@ result.get() for filename in os.listdir(td): - path = os.path.join(td, filename) + '.smi' + path = os.path.join(td, filename) shutil.copyfileobj(open(path, 'rb'), output_handle) output_handle.close()