Mercurial > repos > bgruening > cp_measure_image_quality
comparison measure_image_quality.xml @ 6:d3890df07463 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools commit 57a0433defa3cbc37ab34fbb0ebcfaeb680db8d5
| author | bgruening |
|---|---|
| date | Sun, 05 Nov 2023 09:29:39 +0000 |
| parents | 6f4715b8540a |
| children |
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| 5:6f4715b8540a | 6:d3890df07463 |
|---|---|
| 1 <tool id="cp_measure_image_quality" name="MeasureImageQuality" version="@CP_VERSION@+galaxy@VERSION_SUFFIX@"> | 1 <tool id="cp_measure_image_quality" name="MeasureImageQuality" version="@CP_VERSION@+galaxy@VERSION_SUFFIX@"> |
| 2 <description>measure features that indicate image quality</description> | 2 <description>with CellProfiler</description> |
| 3 | 3 |
| 4 <macros> | 4 <macros> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 <token name="@VERSION_SUFFIX@">0</token> | 6 <token name="@VERSION_SUFFIX@">1</token> |
| 7 <xml name="macro_calc_threshold"> | 7 <xml name="macro_calc_threshold"> |
| 8 <conditional name="con_use_all_methods"> | 8 <conditional name="con_use_all_methods"> |
| 9 <param name="use_all_methods" type="select" display="radio" label="Use all thresholding methods?"> | 9 <param name="use_all_methods" type="select" display="radio" label="Use all thresholding methods?"> |
| 10 <help> | 10 <help> |
| 11 <![CDATA[ | 11 <![CDATA[ |
| 82 <xml name="mog_method"> | 82 <xml name="mog_method"> |
| 83 <param name="mog_fraction_cover" label="Typical fraction of the image covered by objects" type="float" value="0.1" min="0.0" max="1.0"/> | 83 <param name="mog_fraction_cover" label="Typical fraction of the image covered by objects" type="float" value="0.1" min="0.0" max="1.0"/> |
| 84 </xml> | 84 </xml> |
| 85 </macros> | 85 </macros> |
| 86 | 86 |
| 87 <edam_operations> | |
| 88 <edam_operation>operation_3443</edam_operation> | |
| 89 </edam_operations> | |
| 90 <xrefs> | |
| 91 <xref type="bio.tools">CellProfiler</xref> | |
| 92 <xref type="biii">cellprofiler</xref> | |
| 93 </xrefs> | |
| 94 | |
| 87 <expand macro="py_requirements"/> | 95 <expand macro="py_requirements"/> |
| 88 <expand macro="cmd_modules" /> | 96 <expand macro="cmd_modules" /> |
| 89 | 97 |
| 90 <configfiles> | 98 <configfiles> |
| 91 <inputs name="inputs" /> | 99 <inputs name="inputs" /> |