view test-data/test_workflows @ 2:76251d1ccdcc draft

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/recommendation_training/tools/tool_recommendation_model commit 6fa2a0294d615c9f267b766337dca0b2d3637219"
author bgruening
date Fri, 11 Oct 2019 18:24:54 -0400
parents 9bf25dbe00ad
children 5b3c08710e47
line wrap: on
line source

wf_id	wf_updated	in_id	in_tool	in_tool_v	out_id	out_tool	out_tool_v
3	2013-02-07 16:48:00	7	Remove beginning1	1.0.0	5	Grep1	1.0.1
4	2013-02-07 16:48:00	16	wc_gnu	1.0.0	14	bedtools_intersectBed	
4	2013-02-07 16:48:00	18	addValue	1.0.0	16	wc_gnu	1.0.0
4	2013-02-07 16:48:00	13	cat1	1.0.0	18	addValue	1.0.0
4	2013-02-07 16:48:00	21	cshl_uniq_tool	1.0.0	19	cshl_awk_tool	
4	2013-02-07 16:48:00	13	cat1	1.0.0	20	Count1	1.0.0
4	2013-02-07 16:48:00	20	Count1	1.0.0	21	cshl_uniq_tool	1.0.0
4	2013-02-07 16:48:00	14	bedtools_intersectBed		23		
4	2013-02-07 16:48:00	14	bedtools_intersectBed		24		
5	2013-02-07 16:49:00	26	cat1	1.0.0	25	addValue	1.0.0
5	2013-02-07 16:49:00	59	Paste1	1.0.0	27	Cut1	1.0.1
5	2013-02-07 16:49:00	59	Paste1	1.0.0	28	Cut1	1.0.1
5	2013-02-07 16:49:00	66	Paste1	1.0.0	29	Cut1	1.0.1
5	2013-02-07 16:49:00	66	Paste1	1.0.0	30	Cut1	1.0.1
5	2013-02-07 16:49:00	36	Paste1	1.0.0	31	Cut1	1.0.1
5	2013-02-07 16:49:00	36	Paste1	1.0.0	32	Cut1	1.0.1
5	2013-02-07 16:49:00	60	Paste1	1.0.0	33	Cut1	1.0.1
5	2013-02-07 16:49:00	60	Paste1	1.0.0	34	Cut1	1.0.1
5	2013-02-07 16:49:00	64	Add_a_column1	1.1.0	36	Paste1	1.0.0
5	2013-02-07 16:49:00	26	cat1	1.0.0	37	addValue	1.0.0
5	2013-02-07 16:49:00	26	cat1	1.0.0	38	addValue	1.0.0
5	2013-02-07 16:49:00	39	Filter1	1.1.0	40	gops_coverage_1	1.0.0
5	2013-02-07 16:49:00	51	Summary_Statistics1	1.1.0	41	cshl_grep_tool	1.0.0
5	2013-02-07 16:49:00	52	Summary_Statistics1	1.1.0	41	cshl_grep_tool	1.0.0
5	2013-02-07 16:49:00	49	Summary_Statistics1	1.1.0	42	Filter1	1.1.0
5	2013-02-07 16:49:00	50	Summary_Statistics1	1.1.0	42	Filter1	1.1.0
5	2013-02-07 16:49:00	55	Summary_Statistics1	1.1.0	43	Filter1	1.1.0
5	2013-02-07 16:49:00	54	Summary_Statistics1	1.1.0	44	Filter1	1.1.0
5	2013-02-07 16:49:00	57	Cut1	1.0.1	45	Summary_Statistics1	1.1.0
5	2013-02-07 16:49:00	26	cat1	1.0.0	47	addValue	1.0.0
5	2013-02-07 16:49:00	26	cat1	1.0.0	48	addValue	1.0.0
5	2013-02-07 16:49:00	31	Cut1	1.0.1	50	Summary_Statistics1	1.1.0
5	2013-02-07 16:49:00	34	Cut1	1.0.1	51	Summary_Statistics1	1.1.0
5	2013-02-07 16:49:00	33	Cut1	1.0.1	52	Summary_Statistics1	1.1.0
5	2013-02-07 16:49:00	28	Cut1	1.0.1	53	Summary_Statistics1	1.1.0
5	2013-02-07 16:49:00	27	Cut1	1.0.1	54	Summary_Statistics1	1.1.0
5	2013-02-07 16:49:00	30	Cut1	1.0.1	55	Summary_Statistics1	1.1.0
5	2013-02-07 16:49:00	29	Cut1	1.0.1	56	Summary_Statistics1	1.1.0
5	2013-02-07 16:49:00	35	Paste1	1.0.0	57	Cut1	1.0.1
5	2013-02-07 16:49:00	35	Paste1	1.0.0	58	Cut1	1.0.1
5	2013-02-07 16:49:00	62	Add_a_column1	1.1.0	59	Paste1	1.0.0
5	2013-02-07 16:49:00	63	Add_a_column1	1.1.0	60	Paste1	1.0.0
5	2013-02-07 16:49:00	38	addValue	1.0.0	62	Add_a_column1	1.1.0
5	2013-02-07 16:49:00	37	addValue	1.0.0	63	Add_a_column1	1.1.0
5	2013-02-07 16:49:00	47	addValue	1.0.0	64	Add_a_column1	1.1.0
5	2013-02-07 16:49:00	40	gops_coverage_1	1.0.0	68		
5	2013-02-07 16:49:00	40	gops_coverage_1	1.0.0	69		
6	2013-02-07 16:57:00	70	cshl_awk_tool1	1.0.0	71		
9	2013-02-07 16:59:00	84	Remove beginning1	1.0.0	82	Grep1	1.0.1
9	2013-02-07 16:59:00	88	Paste1	1.0.0	85	addValue	1.0.0
9	2013-02-07 16:59:00	88	Paste1	1.0.0	86	Cut1	1.0.1
9	2013-02-07 16:59:00	82	Grep1	1.0.1	89		
11	2013-02-07 17:03:00	145	barchart_gnuplot	1.0.0	136	cat1	1.0.0
11	2013-02-07 17:03:00	170	Paste1	1.0.0	137	Cut1	1.0.1
11	2013-02-07 17:03:00	170	Paste1	1.0.0	138	Cut1	1.0.1
11	2013-02-07 17:03:00	177	Paste1	1.0.0	139	Cut1	1.0.1
11	2013-02-07 17:03:00	177	Paste1	1.0.0	140	Cut1	1.0.1
11	2013-02-07 17:03:00	171	Paste1	1.0.0	143	Cut1	1.0.1
11	2013-02-07 17:03:00	171	Paste1	1.0.0	144	Cut1	1.0.1
11	2013-02-07 17:03:00	176	Add_a_column1	1.1.0	146	Paste1	1.0.0
11	2013-02-07 17:03:00	175	Add_a_column1	1.1.0	147	Paste1	1.0.0
11	2013-02-07 17:03:00	156	Summary_Statistics1	1.1.0	150	Filter1	1.1.0
11	2013-02-07 17:03:00	157	Summary_Statistics1	1.1.0	150	Filter1	1.1.0
11	2013-02-07 17:03:00	155	Filter1	1.1.0	151	gops_coverage_1	1.0.0
11	2013-02-07 17:03:00	162	Summary_Statistics1	1.1.0	152	cshl_grep_tool	1.0.0
11	2013-02-07 17:03:00	163	Summary_Statistics1	1.1.0	152	cshl_grep_tool	1.0.0
11	2013-02-07 17:03:00	160	Summary_Statistics1	1.1.0	153	Filter1	1.1.0
11	2013-02-07 17:03:00	161	Summary_Statistics1	1.1.0	153	Filter1	1.1.0
11	2013-02-07 17:03:00	168	Cut1	1.0.1	156	Summary_Statistics1	1.1.0
11	2013-02-07 17:03:00	141	Cut1	1.0.1	161	Summary_Statistics1	1.1.0
11	2013-02-07 17:03:00	144	Cut1	1.0.1	162	Summary_Statistics1	1.1.0
11	2013-02-07 17:03:00	137	Cut1	1.0.1	165	Summary_Statistics1	1.1.0
11	2013-02-07 17:03:00	146	Paste1	1.0.0	168	Cut1	1.0.1
11	2013-02-07 17:03:00	146	Paste1	1.0.0	169	Cut1	1.0.1
11	2013-02-07 17:03:00	173	Add_a_column1	1.1.0	170	Paste1	1.0.0
11	2013-02-07 17:03:00	174	Add_a_column1	1.1.0	171	Paste1	1.0.0
11	2013-02-07 17:03:00	149	addValue	1.0.0	173	Add_a_column1	1.1.0
11	2013-02-07 17:03:00	148	addValue	1.0.0	174	Add_a_column1	1.1.0
11	2013-02-07 17:03:00	158	addValue	1.0.0	175	Add_a_column1	1.1.0
12	2013-02-07 17:04:00	185	addValue	1.0.0	183	wc_gnu	1.0.0
12	2013-02-07 17:04:00	186	cshl_awk_tool		184	sort1	1.0.1
12	2013-02-07 17:04:00	180	cat1	1.0.0	185	addValue	1.0.0
12	2013-02-07 17:04:00	188	cshl_uniq_tool	1.0.0	186	cshl_awk_tool	
12	2013-02-07 17:04:00	180	cat1	1.0.0	187	Count1	1.0.0
12	2013-02-07 17:04:00	187	Count1	1.0.0	188	cshl_uniq_tool	1.0.0
12	2013-02-07 17:04:00	181	bedtools_intersectBed		190		
12	2013-02-07 17:04:00	182	bedtools_intersectBed		190		
12	2013-02-07 17:04:00	181	bedtools_intersectBed		191		
12	2013-02-07 17:04:00	182	bedtools_intersectBed		191		
19	2013-02-14 15:51:00	194	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		193		
19	2013-02-14 15:51:00	194	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		195		
19	2013-02-14 15:51:00	200	gops_intersect_1	1.0.0	199		
19	2013-02-14 15:51:00	200	gops_intersect_1	1.0.0	201	cshl_find_and_replace	1.0.0
19	2013-02-14 15:51:00	201	cshl_find_and_replace	1.0.0	202	get_flanks1	1.0.0
19	2013-02-14 15:51:00	207	Extract genomic DNA 1	2.2.2	206	cshl_awk_tool	
19	2013-02-14 15:51:00	207	Extract genomic DNA 1	2.2.2	208		
19	2013-02-14 15:51:00	209	Extract genomic DNA 1	2.2.2	208		
19	2013-02-14 15:51:00	213	trap		208		
19	2013-02-14 15:51:00	209	Extract genomic DNA 1	2.2.2	210	cshl_awk_tool	
19	2013-02-14 15:51:00	216	barchart_gnuplot	1.0.0	215	Count1	1.0.0
28	2013-02-14 16:08:00	243	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	242		
28	2013-02-14 16:08:00	243	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	244		
29	2013-02-14 17:12:00	257	gops_subtract_1	1.0.0	251		
29	2013-02-14 17:12:00	262	cshl_awk_tool		252	gops_intersect_1	1.0.0
29	2013-02-14 17:12:00	257	gops_subtract_1	1.0.0	253	cshl_find_and_replace	1.0.0
29	2013-02-14 17:12:00	254	get_flanks1	1.0.0	255		
29	2013-02-14 17:12:00	256	cshl_grep_tool	1.0.0	255		
29	2013-02-14 17:12:00	266	Show beginning1	1.0.0	259	Extract genomic DNA 1	2.2.2
29	2013-02-14 17:12:00	265	trap		260		
29	2013-02-14 17:12:00	263	Show beginning1	1.0.0	261	Extract genomic DNA 1	2.2.2
29	2013-02-14 17:12:00	264	meme_meme	1.0.0	263	Show beginning1	1.0.0
31	2013-02-18 11:33:00	275	addValue	1.0.0	274		
31	2013-02-18 11:33:00	276	mergeCols1	1.0.1	275	addValue	1.0.0
33	2013-02-16 18:11:00	284	gops_intersect_1	1.0.0	283		
33	2013-02-16 18:11:00	284	gops_intersect_1	1.0.0	285		
33	2013-02-16 18:11:00	287	barchart_gnuplot	1.0.0	286	Count1	1.0.0
34	2013-02-18 11:26:00	289	cshl_awk_tool	1.0.0	288		
36	2013-02-18 11:32:00	292	cshl_awk_tool	1.0.0	293		
38	2013-02-18 15:28:00	298	barchart_gnuplot		297	Count1	
39	2013-02-18 15:29:00	302	Count1		301	gops_intersect_1	
39	2013-02-18 15:29:00	303	barchart_gnuplot		302	Count1	
41	2013-02-18 15:36:00	310	gops_intersect_1	1.0.0	309		
41	2013-02-18 15:36:00	312	Count1	1.0.0	310	gops_intersect_1	1.0.0
41	2013-02-18 15:36:00	310	gops_intersect_1	1.0.0	311		
41	2013-02-18 15:36:00	313	barchart_gnuplot	1.0.0	312	Count1	1.0.0
51	2013-02-18 16:17:00	345	barchart_gnuplot		344	Count1	
62	2013-02-18 16:20:00	396	Count1	1.0.0	395		
64	2013-02-18 16:19:00	402	Count1	1.0.0	401		
68	2013-02-18 16:19:00	414	Count1	1.0.0	413		
68	2013-02-18 16:19:00	415	barchart_gnuplot	1.0.0	414	Count1	1.0.0
69	2013-02-18 16:19:00	417	Count1	1.0.0	416		
69	2013-02-18 16:19:00	418	barchart_gnuplot	1.0.0	417	Count1	1.0.0
70	2013-02-18 16:20:00	420	Count1	1.0.0	419		
70	2013-02-18 16:20:00	421	barchart_gnuplot	1.0.0	420	Count1	1.0.0
72	2013-02-18 16:20:00	426	Count1	1.0.0	425		
73	2013-02-18 16:20:00	429	Count1	1.0.0	428		
73	2013-02-18 16:20:00	430	barchart_gnuplot	1.0.0	429	Count1	1.0.0
76	2013-02-18 16:20:00	440	barchart_gnuplot	1.0.0	439	Count1	1.0.0
77	2013-02-18 16:21:00	443	Count1	1.0.0	442		
77	2013-02-18 16:21:00	444	barchart_gnuplot	1.0.0	443	Count1	1.0.0
78	2013-02-18 16:21:00	446	Count1	1.0.0	445		
78	2013-02-18 16:21:00	447	barchart_gnuplot	1.0.0	446	Count1	1.0.0
81	2013-02-18 16:22:00	466	addValue	1.0.0	465		
81	2013-02-18 16:22:00	468	Cut1	1.0.1	467	mergeCols1	1.0.1
81	2013-02-18 16:22:00	474	barchart_gnuplot	1.0.0	473	Count1	1.0.0
82	2013-02-18 16:22:00	477	addValue	1.0.0	476	CONVERTER_interval_to_bedstrict_0	1.0.0
82	2013-02-18 16:22:00	478	mergeCols1	1.0.1	477	addValue	1.0.0
82	2013-02-18 16:22:00	483	gops_intersect_1	1.0.0	482	get_flanks1	1.0.0
82	2013-02-18 16:22:00	483	gops_intersect_1	1.0.0	484	cshl_find_and_replace	1.0.0
82	2013-02-18 16:22:00	485	CONVERTER_interval_to_bed_0	1.0.0	484	cshl_find_and_replace	1.0.0
82	2013-02-18 16:22:00	488	barchart_gnuplot	1.0.0	487	Count1	1.0.0
83	2013-02-18 19:10:00	492	Count1	1.0.0	490	gops_intersect_1	1.0.0
86	2013-02-19 12:08:00	505	gops_intersect_1	1.0.0	504		
86	2013-02-19 12:08:00	505	gops_intersect_1	1.0.0	506		
86	2013-02-19 12:08:00	508	barchart_gnuplot	1.0.0	507	Count1	1.0.0
95	2013-02-20 10:03:00	672	gops_intersect_1	1.0.0	671		
95	2013-02-20 10:03:00	672	gops_intersect_1	1.0.0	673		
97	2013-02-20 10:11:00	701	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	700		
97	2013-02-20 10:11:00	701	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	702		
97	2013-02-20 10:11:00	708	gops_intersect_1	1.0.0	703	cshl_awk_tool	1.0.0
97	2013-02-20 10:11:00	711	Extract genomic DNA 1	2.2.2	704	gops_subtract_1	1.0.0
97	2013-02-20 10:11:00	708	gops_intersect_1	1.0.0	705	cshl_awk_tool	1.0.0
97	2013-02-20 10:11:00	706	get_flanks1	1.0.0	707		
97	2013-02-20 10:11:00	711	Extract genomic DNA 1	2.2.2	710		
97	2013-02-20 10:11:00	714	tab2fasta	1.1.0	713	Show beginning1	1.0.0
97	2013-02-20 10:11:00	715	meme_meme	1.0.0	714	tab2fasta	1.1.0
97	2013-02-20 10:11:00	717	Show beginning1	1.0.0	716	fasta2tab	1.1.0
97	2013-02-20 10:11:00	718	tab2fasta	1.1.0	717	Show beginning1	1.0.0
97	2013-02-20 10:11:00	721	barchart_gnuplot	1.0.0	720	Count1	1.0.0
98	2013-02-20 10:44:00	726	mergeCols1	1.0.1	725	addValue	1.0.0
100	2013-02-20 11:16:00	733	addValue	1.0.0	732		
100	2013-02-20 11:16:00	734	mergeCols1	1.0.1	733	addValue	1.0.0
100	2013-02-20 11:16:00	735	Cut1	1.0.1	734	mergeCols1	1.0.1
101	2013-02-20 14:16:00	737	addValue	1.0.0	736		
103	2013-02-20 15:32:00	741	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		740		
103	2013-02-20 15:32:00	743	cshl_awk_tool		741	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	
103	2013-02-20 15:32:00	741	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		742		
103	2013-02-20 15:32:00	760	Extract genomic DNA 1		754	gops_intersect_1	
103	2013-02-20 15:32:00	755	get_flanks1		756		
103	2013-02-20 15:32:00	760	Extract genomic DNA 1		761		
106	2013-02-20 15:46:00	810	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	811		
106	2013-02-20 15:46:00	810	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	812		
106	2013-02-20 15:46:00	822	Extract genomic DNA 1	2.2.2	814	gops_subtract_1	1.0.0
106	2013-02-20 15:46:00	823	Count1	1.0.0	814	gops_subtract_1	1.0.0
106	2013-02-20 15:46:00	824	fasta2tab	1.1.0	819	Extract genomic DNA 1	2.2.2
106	2013-02-20 15:46:00	822	Extract genomic DNA 1	2.2.2	820		
106	2013-02-20 15:46:00	825	barchart_gnuplot	1.0.0	821	Count1	1.0.0
106	2013-02-20 15:46:00	826	fasta2tab	1.1.0	822	Extract genomic DNA 1	2.2.2
106	2013-02-20 15:46:00	827	barchart_gnuplot	1.0.0	823	Count1	1.0.0
106	2013-02-20 15:46:00	828	Show beginning1	1.0.0	826	fasta2tab	1.1.0
106	2013-02-20 15:46:00	830	meme_meme	1.0.0	829	tab2fasta	1.1.0
106	2013-02-20 15:46:00	833	meme_meme	1.0.0	832	tab2fasta	1.1.0
109	2013-02-20 15:49:00	879	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		878		
109	2013-02-20 15:49:00	879	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		880		
109	2013-02-20 15:49:00	887	gops_subtract_1		883		
109	2013-02-20 15:49:00	887	gops_subtract_1		885	get_flanks1	
109	2013-02-20 15:49:00	891	Show beginning1		890	fasta2tab	
109	2013-02-20 15:49:00	892	tab2fasta		891	Show beginning1	
109	2013-02-20 15:49:00	893	meme_meme		892	tab2fasta	
110	2013-02-20 15:54:00	897	cshl_awk_tool	1.0.0	895	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1
110	2013-02-20 15:54:00	901	gops_subtract_1	1.0.0	900		
110	2013-02-20 15:54:00	901	gops_subtract_1	1.0.0	902	get_flanks1	1.0.0
110	2013-02-20 15:54:00	902	get_flanks1	1.0.0	903		
110	2013-02-20 15:54:00	905	Extract genomic DNA 1	2.2.2	904	gops_intersect_1	1.0.0
110	2013-02-20 15:54:00	911	Count1	1.0.0	904	gops_intersect_1	1.0.0
110	2013-02-20 15:54:00	907	fasta2tab	1.1.0	905	Extract genomic DNA 1	2.2.2
110	2013-02-20 15:54:00	905	Extract genomic DNA 1	2.2.2	906		
110	2013-02-20 15:54:00	909	tab2fasta	1.1.0	908	Show beginning1	1.0.0
110	2013-02-20 15:54:00	910	meme_meme	1.0.0	909	tab2fasta	1.1.0
110	2013-02-20 15:54:00	912	barchart_gnuplot	1.0.0	911	Count1	1.0.0
110	2013-02-20 15:54:00	914	barchart_gnuplot	1.0.0	913	Count1	1.0.0
111	2013-02-20 15:51:00	926	gops_subtract_1		922		
111	2013-02-20 15:51:00	933	Count1		923	gops_intersect_1	
111	2013-02-20 15:51:00	926	gops_subtract_1		924	get_flanks1	
111	2013-02-20 15:51:00	929	fasta2tab		927	Extract genomic DNA 1	
111	2013-02-20 15:51:00	930	Show beginning1		929	fasta2tab	
112	2013-02-20 15:51:00	944	get_flanks1		945		
112	2013-02-20 15:51:00	946	get_flanks1		945		
112	2013-02-20 15:51:00	953	Count1		947	gops_intersect_1	
112	2013-02-20 15:51:00	954	Extract genomic DNA 1		947	gops_intersect_1	
112	2013-02-20 15:51:00	952	barchart_gnuplot		951	Count1	
112	2013-02-20 15:51:00	956	fasta2tab		954	Extract genomic DNA 1	
112	2013-02-20 15:51:00	954	Extract genomic DNA 1		955		
112	2013-02-20 15:51:00	957	Show beginning1		956	fasta2tab	
112	2013-02-20 15:51:00	958	tab2fasta		957	Show beginning1	
113	2013-02-20 15:52:00	964	cshl_awk_tool		961	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	
113	2013-02-20 15:52:00	968	gops_intersect_1		967		
113	2013-02-20 15:52:00	971	gops_subtract_1		967		
113	2013-02-20 15:52:00	968	gops_intersect_1		969	get_flanks1	
113	2013-02-20 15:52:00	971	gops_subtract_1		969	get_flanks1	
113	2013-02-20 15:52:00	969	get_flanks1		970		
113	2013-02-20 15:52:00	979	fasta2tab		977	Extract genomic DNA 1	
114	2013-02-20 15:58:00	985	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		984		
114	2013-02-20 15:58:00	987	cshl_awk_tool		985	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	
114	2013-02-20 15:58:00	985	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		986		
114	2013-02-20 15:58:00	991	gops_intersect_1		990		
114	2013-02-20 15:58:00	995	gops_subtract_1		990		
114	2013-02-20 15:58:00	998	Extract genomic DNA 1		991	gops_intersect_1	
114	2013-02-20 15:58:00	991	gops_intersect_1		992	get_flanks1	
114	2013-02-20 15:58:00	995	gops_subtract_1		992	get_flanks1	
114	2013-02-20 15:58:00	997	barchart_gnuplot		996	Count1	
114	2013-02-20 15:58:00	1000	fasta2tab		998	Extract genomic DNA 1	
114	2013-02-20 15:58:00	998	Extract genomic DNA 1		999		
114	2013-02-20 15:58:00	1001	Show beginning1		1000	fasta2tab	
114	2013-02-20 15:58:00	1002	tab2fasta		1001	Show beginning1	
115	2013-02-20 16:00:00	1006	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	1005		
115	2013-02-20 16:00:00	1006	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	1007		
115	2013-02-20 16:00:00	1009	gops_subtract_1	1.0.0	1008	cshl_awk_tool	1.0.0
115	2013-02-20 16:00:00	1027	Count1	1.0.0	1009	gops_subtract_1	1.0.0
115	2013-02-20 16:00:00	1009	gops_subtract_1	1.0.0	1010	cshl_awk_tool	1.0.0
115	2013-02-20 16:00:00	1011	get_flanks1	1.0.0	1012		
115	2013-02-20 16:00:00	1025	Count1	1.0.0	1013	gops_intersect_1	1.0.0
115	2013-02-20 16:00:00	1021	fasta2tab	1.1.0	1014	Extract genomic DNA 1	2.2.2
115	2013-02-20 16:00:00	1017	fasta2tab	1.1.0	1016	Extract genomic DNA 1	2.2.2
115	2013-02-20 16:00:00	1019	tab2fasta	1.1.0	1018	Show beginning1	1.0.0
115	2013-02-20 16:00:00	1024	meme_meme	1.0.0	1023	tab2fasta	1.1.0
116	2013-02-20 16:00:00	1033	gops_subtract_1	1.0.0	1032	cshl_awk_tool	1.0.0
116	2013-02-20 16:00:00	1037	gops_intersect_1	1.0.0	1032	cshl_awk_tool	1.0.0
116	2013-02-20 16:00:00	1040	Extract genomic DNA 1	2.2.2	1033	gops_subtract_1	1.0.0
116	2013-02-20 16:00:00	1051	Count1	1.0.0	1033	gops_subtract_1	1.0.0
116	2013-02-20 16:00:00	1033	gops_subtract_1	1.0.0	1034	cshl_awk_tool	1.0.0
116	2013-02-20 16:00:00	1037	gops_intersect_1	1.0.0	1034	cshl_awk_tool	1.0.0
116	2013-02-20 16:00:00	1034	cshl_awk_tool	1.0.0	1035	get_flanks1	1.0.0
116	2013-02-20 16:00:00	1035	get_flanks1	1.0.0	1036		
116	2013-02-20 16:00:00	1040	Extract genomic DNA 1	2.2.2	1039		
116	2013-02-20 16:00:00	1041	fasta2tab	1.1.0	1040	Extract genomic DNA 1	2.2.2
116	2013-02-20 16:00:00	1044	meme_meme	1.0.0	1043	tab2fasta	1.1.0
116	2013-02-20 16:00:00	1050	barchart_gnuplot	1.0.0	1049	Count1	1.0.0
117	2013-02-20 16:00:00	1054	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	1053		
117	2013-02-20 16:00:00	1056	cshl_awk_tool	1.0.0	1054	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1
117	2013-02-20 16:00:00	1054	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	1055		
117	2013-02-20 16:00:00	1064	Extract genomic DNA 1	2.2.2	1057	gops_subtract_1	1.0.0
117	2013-02-20 16:00:00	1073	Count1	1.0.0	1061	gops_intersect_1	1.0.0
117	2013-02-20 16:00:00	1064	Extract genomic DNA 1	2.2.2	1063		
117	2013-02-20 16:00:00	1067	tab2fasta	1.1.0	1066	Show beginning1	1.0.0
117	2013-02-20 16:00:00	1070	Show beginning1	1.0.0	1069	fasta2tab	1.1.0
117	2013-02-20 16:00:00	1076	barchart_gnuplot	1.0.0	1075	Count1	1.0.0
118	2013-02-20 16:00:00	1078	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	1077		
118	2013-02-20 16:00:00	1080	cshl_awk_tool	1.0.0	1078	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1
118	2013-02-20 16:00:00	1078	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1	1079		
118	2013-02-20 16:00:00	1081	gops_subtract_1	1.0.0	1080	cshl_awk_tool	1.0.0
118	2013-02-20 16:00:00	1085	gops_intersect_1	1.0.0	1080	cshl_awk_tool	1.0.0
118	2013-02-20 16:00:00	1088	Extract genomic DNA 1	2.2.2	1081	gops_subtract_1	1.0.0
118	2013-02-20 16:00:00	1081	gops_subtract_1	1.0.0	1082	cshl_awk_tool	1.0.0
118	2013-02-20 16:00:00	1085	gops_intersect_1	1.0.0	1082	cshl_awk_tool	1.0.0
118	2013-02-20 16:00:00	1082	cshl_awk_tool	1.0.0	1083	get_flanks1	1.0.0
118	2013-02-20 16:00:00	1083	get_flanks1	1.0.0	1084		
118	2013-02-20 16:00:00	1086	Extract genomic DNA 1	2.2.2	1085	gops_intersect_1	1.0.0
118	2013-02-20 16:00:00	1086	Extract genomic DNA 1	2.2.2	1087		
118	2013-02-20 16:00:00	1088	Extract genomic DNA 1	2.2.2	1087		
118	2013-02-20 16:00:00	1090	Show beginning1	1.0.0	1089	fasta2tab	1.1.0
118	2013-02-20 16:00:00	1094	Show beginning1	1.0.0	1093	fasta2tab	1.1.0
118	2013-02-20 16:00:00	1095	tab2fasta	1.1.0	1094	Show beginning1	1.0.0
118	2013-02-20 16:00:00	1096	meme_meme	1.0.0	1095	tab2fasta	1.1.0
118	2013-02-20 16:00:00	1098	barchart_gnuplot	1.0.0	1097	Count1	1.0.0
118	2013-02-20 16:00:00	1100	barchart_gnuplot	1.0.0	1099	Count1	1.0.0
119	2013-02-20 16:01:00	1104	cshl_awk_tool	1.0.0	1102	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1
119	2013-02-20 16:01:00	1109	gops_intersect_1	1.0.0	1104	cshl_awk_tool	1.0.0
119	2013-02-20 16:01:00	1123	Count1	1.0.0	1105	gops_subtract_1	1.0.0
119	2013-02-20 16:01:00	1109	gops_intersect_1	1.0.0	1106	cshl_awk_tool	1.0.0
119	2013-02-20 16:01:00	1106	cshl_awk_tool	1.0.0	1107	get_flanks1	1.0.0
119	2013-02-20 16:01:00	1107	get_flanks1	1.0.0	1108		
119	2013-02-20 16:01:00	1110	Extract genomic DNA 1	2.2.2	1109	gops_intersect_1	1.0.0
119	2013-02-20 16:01:00	1121	Count1	1.0.0	1109	gops_intersect_1	1.0.0
119	2013-02-20 16:01:00	1110	Extract genomic DNA 1	2.2.2	1111		
119	2013-02-20 16:01:00	1113	fasta2tab	1.1.0	1112	Extract genomic DNA 1	2.2.2
119	2013-02-20 16:01:00	1114	Show beginning1	1.0.0	1113	fasta2tab	1.1.0
119	2013-02-20 16:01:00	1118	Show beginning1	1.0.0	1117	fasta2tab	1.1.0
119	2013-02-20 16:01:00	1120	meme_meme	1.0.0	1119	tab2fasta	1.1.0
119	2013-02-20 16:01:00	1122	barchart_gnuplot	1.0.0	1121	Count1	1.0.0
120	2013-02-20 16:02:00	1128	cshl_awk_tool	1.0.0	1126	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1
120	2013-02-20 16:02:00	1133	gops_intersect_1	1.0.0	1128	cshl_awk_tool	1.0.0
120	2013-02-20 16:02:00	1133	gops_intersect_1	1.0.0	1130	cshl_awk_tool	1.0.0
120	2013-02-20 16:02:00	1131	get_flanks1	1.0.0	1132		
120	2013-02-20 16:02:00	1134	Extract genomic DNA 1	2.2.2	1133	gops_intersect_1	1.0.0
120	2013-02-20 16:02:00	1145	Count1	1.0.0	1133	gops_intersect_1	1.0.0
120	2013-02-20 16:02:00	1134	Extract genomic DNA 1	2.2.2	1135		
120	2013-02-20 16:02:00	1137	fasta2tab	1.1.0	1136	Extract genomic DNA 1	2.2.2
120	2013-02-20 16:02:00	1138	Show beginning1	1.0.0	1137	fasta2tab	1.1.0
120	2013-02-20 16:02:00	1140	meme_meme	1.0.0	1139	tab2fasta	1.1.0
121	2013-02-20 16:06:00	1152	cshl_awk_tool	1.0.0	1150	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	1.4.1
121	2013-02-20 16:06:00	1153	gops_subtract_1	1.0.0	1152	cshl_awk_tool	1.0.0
121	2013-02-20 16:06:00	1160	Extract genomic DNA 1	2.2.2	1153	gops_subtract_1	1.0.0
121	2013-02-20 16:06:00	1171	Count1	1.0.0	1153	gops_subtract_1	1.0.0
121	2013-02-20 16:06:00	1153	gops_subtract_1	1.0.0	1154	cshl_awk_tool	1.0.0
121	2013-02-20 16:06:00	1158	Extract genomic DNA 1	2.2.2	1157	gops_intersect_1	1.0.0
121	2013-02-20 16:06:00	1169	Count1	1.0.0	1157	gops_intersect_1	1.0.0
121	2013-02-20 16:06:00	1165	fasta2tab	1.1.0	1158	Extract genomic DNA 1	2.2.2
121	2013-02-20 16:06:00	1158	Extract genomic DNA 1	2.2.2	1159		
121	2013-02-20 16:06:00	1160	Extract genomic DNA 1	2.2.2	1159		
121	2013-02-20 16:06:00	1161	fasta2tab	1.1.0	1160	Extract genomic DNA 1	2.2.2
121	2013-02-20 16:06:00	1162	Show beginning1	1.0.0	1161	fasta2tab	1.1.0
121	2013-02-20 16:06:00	1163	tab2fasta	1.1.0	1162	Show beginning1	1.0.0
121	2013-02-20 16:06:00	1164	meme_meme	1.0.0	1163	tab2fasta	1.1.0
121	2013-02-20 16:06:00	1167	tab2fasta	1.1.0	1166	Show beginning1	1.0.0
121	2013-02-20 16:06:00	1170	barchart_gnuplot	1.0.0	1169	Count1	1.0.0
121	2013-02-20 16:06:00	1172	barchart_gnuplot	1.0.0	1171	Count1	1.0.0
124	2013-02-21 16:53:00	1264	cat1	1.0.0	1263	addValue	1.0.0
124	2013-02-21 16:53:00	1305	Paste1	1.0.0	1267	Cut1	1.0.1
124	2013-02-21 16:53:00	1305	Paste1	1.0.0	1268	Cut1	1.0.1
124	2013-02-21 16:53:00	1275	Paste1	1.0.0	1269	Cut1	1.0.1
124	2013-02-21 16:53:00	1275	Paste1	1.0.0	1270	Cut1	1.0.1
124	2013-02-21 16:53:00	1299	Paste1	1.0.0	1271	Cut1	1.0.1
124	2013-02-21 16:53:00	1299	Paste1	1.0.0	1272	Cut1	1.0.1
124	2013-02-21 16:53:00	1304	Add_a_column1	1.1.0	1274	Paste1	1.0.0
124	2013-02-21 16:53:00	1264	cat1	1.0.0	1276	addValue	1.0.0
124	2013-02-21 16:53:00	1264	cat1	1.0.0	1277	addValue	1.0.0
124	2013-02-21 16:53:00	1284	Summary_Statistics1	1.1.0	1278	Filter1	1.1.0
124	2013-02-21 16:53:00	1285	Summary_Statistics1	1.1.0	1278	Filter1	1.1.0
124	2013-02-21 16:53:00	1278	Filter1	1.1.0	1279	gops_coverage_1	1.0.0
124	2013-02-21 16:53:00	1280	cshl_grep_tool	1.0.0	1279	gops_coverage_1	1.0.0
124	2013-02-21 16:53:00	1281	Filter1	1.1.0	1279	gops_coverage_1	1.0.0
124	2013-02-21 16:53:00	1282	Filter1	1.1.0	1279	gops_coverage_1	1.0.0
124	2013-02-21 16:53:00	1291	Summary_Statistics1	1.1.0	1280	cshl_grep_tool	1.0.0
124	2013-02-21 16:53:00	1288	Summary_Statistics1	1.1.0	1281	Filter1	1.1.0
124	2013-02-21 16:53:00	1289	Summary_Statistics1	1.1.0	1281	Filter1	1.1.0
124	2013-02-21 16:53:00	1294	Summary_Statistics1	1.1.0	1282	Filter1	1.1.0
124	2013-02-21 16:53:00	1295	Summary_Statistics1	1.1.0	1282	Filter1	1.1.0
124	2013-02-21 16:53:00	1293	Summary_Statistics1	1.1.0	1283	Filter1	1.1.0
124	2013-02-21 16:53:00	1296	Cut1	1.0.1	1284	Summary_Statistics1	1.1.0
124	2013-02-21 16:53:00	1297	Cut1	1.0.1	1285	Summary_Statistics1	1.1.0
124	2013-02-21 16:53:00	1264	cat1	1.0.0	1286	addValue	1.0.0
124	2013-02-21 16:53:00	1264	cat1	1.0.0	1287	addValue	1.0.0
124	2013-02-21 16:53:00	1269	Cut1	1.0.1	1289	Summary_Statistics1	1.1.0
124	2013-02-21 16:53:00	1272	Cut1	1.0.1	1290	Summary_Statistics1	1.1.0
124	2013-02-21 16:53:00	1271	Cut1	1.0.1	1291	Summary_Statistics1	1.1.0
124	2013-02-21 16:53:00	1268	Cut1	1.0.1	1294	Summary_Statistics1	1.1.0
124	2013-02-21 16:53:00	1274	Paste1	1.0.0	1296	Cut1	1.0.1
124	2013-02-21 16:53:00	1274	Paste1	1.0.0	1297	Cut1	1.0.1
124	2013-02-21 16:53:00	1302	Add_a_column1	1.1.0	1299	Paste1	1.0.0
124	2013-02-21 16:53:00	1277	addValue	1.0.0	1301	Add_a_column1	1.1.0
124	2013-02-21 16:53:00	1276	addValue	1.0.0	1302	Add_a_column1	1.1.0
124	2013-02-21 16:53:00	1279	gops_coverage_1	1.0.0	1306		
124	2013-02-21 16:53:00	1279	gops_coverage_1	1.0.0	1307		
125	2013-02-21 16:55:00	1317	barchart_gnuplot	1.0.0	1308	cat1	1.0.0
125	2013-02-21 16:55:00	1311	wc_gnu	1.0.0	1309	bedtools_intersectBed	
125	2013-02-21 16:55:00	1312	sort1	1.0.1	1310	bedtools_intersectBed	
125	2013-02-21 16:55:00	1316	cshl_uniq_tool	1.0.0	1314	cshl_awk_tool	1.0.0
125	2013-02-21 16:55:00	1315	Count1	1.0.0	1316	cshl_uniq_tool	1.0.0
127	2013-02-22 13:15:00	1332	barchart_gnuplot	1.0.0	1333	cat1	1.0.0
127	2013-02-22 13:15:00	1337	sort1	1.0.1	1335	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0	0.1.0
127	2013-02-22 13:15:00	1339	cshl_awk_tool	1.0.0	1337	sort1	1.0.1
127	2013-02-22 13:15:00	1333	cat1	1.0.0	1338	addValue	1.0.0
127	2013-02-22 13:15:00	1341	cshl_uniq_tool	1.0.0	1339	cshl_awk_tool	1.0.0
127	2013-02-22 13:15:00	1333	cat1	1.0.0	1340	Count1	1.0.0
129	2013-02-22 13:29:00	1356	barchart_gnuplot	1.0.0	1357	cat1	1.0.0
129	2013-02-22 13:29:00	1361	sort1	1.0.1	1359	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0	0.1.0
129	2013-02-22 13:29:00	1363	cshl_awk_tool	1.0.0	1361	sort1	1.0.1
129	2013-02-22 13:29:00	1365	cshl_uniq_tool	1.0.0	1363	cshl_awk_tool	1.0.0
129	2013-02-22 13:29:00	1364	Count1	1.0.0	1365	cshl_uniq_tool	1.0.0
130	2013-02-22 13:55:00	1373	sort1	1.0.1	1371	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0	0.1.0
130	2013-02-22 13:55:00	1374	addValue	1.0.0	1372	wc_gnu	1.0.0
130	2013-02-22 13:55:00	1369	cat1	1.0.0	1374	addValue	1.0.0
130	2013-02-22 13:55:00	1377	cshl_uniq_tool	1.0.0	1375	cshl_awk_tool	1.0.0
130	2013-02-22 13:55:00	1369	cat1	1.0.0	1376	Count1	1.0.0
130	2013-02-22 13:55:00	1370	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0	0.1.0	1378		
130	2013-02-22 13:55:00	1370	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_intersectbed_bam/0.1.0	0.1.0	1379		
131	2013-02-22 14:30:00	1384	Cut1		1385	Add_a_column1	
131	2013-02-22 14:30:00	1385	Add_a_column1		1386	Add_a_column1	
133	2013-02-22 15:23:00	1390	bam_to_sam		1389		
133	2013-02-22 15:23:00	1392	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		1389		
133	2013-02-22 15:23:00	1391	toolshed.g2.bx.psu.edu/repos/devteam/picard/PicardASMetrics/1.56.0		1390	bam_to_sam	
133	2013-02-22 15:23:00	1397	cshl_awk_tool		1392	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	
133	2013-02-22 15:23:00	1409	cshl_awk_tool		1392	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1	
133	2013-02-22 15:23:00	1392	toolshed.g2.bx.psu.edu/repos/ryo-tas/macs14/peakcalling_macs14/1.4.1		1393		
133	2013-02-22 15:23:00	1394	bam_to_sam		1393		
133	2013-02-22 15:23:00	1395	toolshed.g2.bx.psu.edu/repos/devteam/picard/picard_BamIndexStats/1.56.0		1393		
133	2013-02-22 15:23:00	1398	gops_intersect_1		1397	cshl_awk_tool	
133	2013-02-22 15:23:00	1401	CONVERTER_interval_to_bed_0		1398	gops_intersect_1	
133	2013-02-22 15:23:00	1398	gops_intersect_1		1399	get_flanks1	
133	2013-02-22 15:23:00	1402	Count1		1401	CONVERTER_interval_to_bed_0	
133	2013-02-22 15:23:00	1403	Extract genomic DNA 1		1401	CONVERTER_interval_to_bed_0	
133	2013-02-22 15:23:00	1403	Extract genomic DNA 1		1404		
133	2013-02-22 15:23:00	1408	meme_meme		1407	tab2fasta	
133	2013-02-22 15:23:00	1411	bam_to_sam		1410		
136	2013-02-22 18:24:00	1431	bams2ratio	1.3	1430		
136	2013-02-22 18:24:00	1433	heatmapper	1.3	1431	bams2ratio	1.3
136	2013-02-22 18:24:00	1431	bams2ratio	1.3	1432		
136	2013-02-22 18:24:00	1433	heatmapper	1.3	1434		
139	2013-02-22 18:45:00	1472	Show beginning1	1.0.0	1473	fasta2tab	1.1.0
139	2013-02-22 18:45:00	1473	fasta2tab	1.1.0	1474	Extract genomic DNA 1	2.2.2
139	2013-02-22 18:45:00	1474	Extract genomic DNA 1	2.2.2	1475		
141	2013-02-22 18:57:00	1488	Cut1	1.0.1	1489	cshl_uniq_tool	1.0.0
141	2013-02-22 18:57:00	1490	gops_intersect_1	1.0.0	1491		
141	2013-02-22 18:57:00	1490	gops_intersect_1	1.0.0	1492		
142	2013-02-25 10:04:00	1529	Paste1	1.0.0	1501	Cut1	1.0.1
142	2013-02-25 10:04:00	1529	Paste1	1.0.0	1502	Cut1	1.0.1
142	2013-02-25 10:04:00	1534	Add_a_column1	1.1.0	1504	Paste1	1.0.0
142	2013-02-25 10:04:00	1515	Summary_Statistics1	1.1.0	1508	Filter1	1.1.0
142	2013-02-25 10:04:00	1508	Filter1	1.1.0	1509	gops_coverage_1	1.0.0
142	2013-02-25 10:04:00	1510	cshl_grep_tool	1.0.0	1509	gops_coverage_1	1.0.0
142	2013-02-25 10:04:00	1511	Filter1	1.1.0	1509	gops_coverage_1	1.0.0
142	2013-02-25 10:04:00	1512	Filter1	1.1.0	1509	gops_coverage_1	1.0.0
142	2013-02-25 10:04:00	1520	Summary_Statistics1	1.1.0	1510	cshl_grep_tool	1.0.0
142	2013-02-25 10:04:00	1519	Summary_Statistics1	1.1.0	1511	Filter1	1.1.0
142	2013-02-25 10:04:00	1524	Summary_Statistics1	1.1.0	1512	Filter1	1.1.0
142	2013-02-25 10:04:00	1526	Cut1	1.0.1	1514	Summary_Statistics1	1.1.0
142	2013-02-25 10:04:00	1500	Cut1	1.0.1	1518	Summary_Statistics1	1.1.0
142	2013-02-25 10:04:00	1499	Cut1	1.0.1	1519	Summary_Statistics1	1.1.0
142	2013-02-25 10:04:00	1502	Cut1	1.0.1	1520	Summary_Statistics1	1.1.0
142	2013-02-25 10:04:00	1501	Cut1	1.0.1	1521	Summary_Statistics1	1.1.0
142	2013-02-25 10:04:00	1498	Cut1	1.0.1	1524	Summary_Statistics1	1.1.0
142	2013-02-25 10:04:00	1497	Cut1	1.0.1	1525	Summary_Statistics1	1.1.0
142	2013-02-25 10:04:00	1504	Paste1	1.0.0	1526	Cut1	1.0.1
142	2013-02-25 10:04:00	1504	Paste1	1.0.0	1527	Cut1	1.0.1
142	2013-02-25 10:04:00	1531	Add_a_column1	1.1.0	1528	Paste1	1.0.0
142	2013-02-25 10:04:00	1493	addValue	1.0.0	1530	Add_a_column1	1.1.0
142	2013-02-25 10:04:00	1506	addValue	1.0.0	1532	Add_a_column1	1.1.0
142	2013-02-25 10:04:00	1509	gops_coverage_1	1.0.0	1536		
142	2013-02-25 10:04:00	1509	gops_coverage_1	1.0.0	1537		
148	2013-03-17 21:43:00	1613	Filter1	1.1.0	1604		
148	2013-03-17 21:43:00	1615	Filter1	1.1.0	1604		
148	2013-03-17 21:43:00	1621	Filter1	1.1.0	1604		
148	2013-03-17 21:43:00	1623	Filter1	1.1.0	1604		
148	2013-03-17 21:43:00	1618	Paste1	1.0.0	1616	Paste1	1.0.0
148	2013-03-17 21:43:00	1618	Paste1	1.0.0	1619	Filter1	1.1.0
148	2013-03-17 21:43:00	1626	Paste1	1.0.0	1624	Paste1	1.0.0
148	2013-03-17 21:43:00	1626	Paste1	1.0.0	1627	Filter1	1.1.0
148	2013-03-17 21:43:00	1629	Show tail1	1.0.0	1628	Cut1	1.0.1
148	2013-03-17 21:43:00	1632	Add_a_column1	1.1.0	1631	Add_a_column1	1.1.0
148	2013-03-17 21:43:00	1634	Add_a_column1	1.1.0	1633	Add_a_column1	1.1.0
148	2013-03-17 21:43:00	1636	Cut1	1.0.1	1635	Add_a_column1	1.1.0
148	2013-03-17 21:43:00	1638	Add_a_column1	1.1.0	1637	Add_a_column1	1.1.0
148	2013-03-17 21:43:00	1639	Add_a_column1	1.1.0	1638	Add_a_column1	1.1.0
148	2013-03-17 21:43:00	1640	Add_a_column1	1.1.0	1639	Add_a_column1	1.1.0
148	2013-03-17 21:43:00	1642	Cut1	1.0.1	1641	Add_a_column1	1.1.0
150	2013-03-25 09:27:00	1652	comp1	1.0.2	1653	Show beginning1	1.0.0
150	2013-03-25 09:27:00	1652	comp1	1.0.2	1654		
150	2013-03-25 09:27:00	1655	gops_join_1	1.0.0	1654		
150	2013-03-25 09:27:00	1655	gops_join_1	1.0.0	1656		
150	2013-03-25 09:27:00	1653	Show beginning1	1.0.0	1658	sort1	1.0.1
153	2013-04-09 12:18:00	1766	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0	0.1.0	1765		
153	2013-04-09 12:18:00	1772	Add_a_column1	1.1.0	1766	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0	0.1.0
153	2013-04-09 12:18:00	1766	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0	0.1.0	1767		
153	2013-04-09 12:18:00	1766	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0	0.1.0	1768		
153	2013-04-09 12:18:00	1766	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0	0.1.0	1769		
153	2013-04-09 12:18:00	1766	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0	0.1.0	1770		
153	2013-04-09 12:18:00	1766	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_multiintersectbed/0.1.0	0.1.0	1771		
153	2013-04-09 12:18:00	1773	Cut1	1.0.1	1772	Add_a_column1	1.1.0
153	2013-04-09 12:18:00	1798	Add_a_column1	1.1.0	1774	toolshed.g2.bx.psu.edu/repos/aaronquinlan/bedtools/bedtools_mergebedgraph/0.1.0	0.1.0
153	2013-04-09 12:18:00	1799	Filter1	1.1.0	1798	Add_a_column1	1.1.0
153	2013-04-09 12:18:00	1801	Cut1	1.0.1	1802		
155	2013-04-10 19:28:00	1818	bismark_bowtie	0.7.7.3	1817		
155	2013-04-10 19:28:00	1818	bismark_bowtie	0.7.7.3	1819		
155	2013-04-10 19:28:00	1818	bismark_bowtie	0.7.7.3	1820		
155	2013-04-10 19:28:00	1818	bismark_bowtie	0.7.7.3	1821		
155	2013-04-10 19:28:00	1818	bismark_bowtie	0.7.7.3	1822		
155	2013-04-10 19:28:00	1818	bismark_bowtie	0.7.7.3	1823		
155	2013-04-10 19:28:00	1825	samtools_rmdup	1.0.0	1824	sam_to_bam	1.1.2
155	2013-04-10 19:28:00	1826	methtools_calling	0.1.1	1825	samtools_rmdup	1.0.0
158	2013-04-18 07:56:00	1888	Cut1	1.0.1	1887		
158	2013-04-18 07:56:00	1890	Add_a_column1	1.1.0	1889	Filter1	1.1.0
158	2013-04-18 07:56:00	1891	cshl_find_and_replace	1.0.0	1890	Add_a_column1	1.1.0
158	2013-04-18 07:56:00	1892	cshl_find_and_replace	1.0.0	1891	cshl_find_and_replace	1.0.0
158	2013-04-18 07:56:00	1895	cshl_find_and_replace	1.0.0	1894	cshl_find_and_replace	1.0.0
158	2013-04-18 07:56:00	1898	cshl_find_and_replace	1.0.0	1897	cshl_find_and_replace	1.0.0
158	2013-04-18 07:56:00	1901	Cut1	1.0.1	1900	Add_a_column1	1.1.0
158	2013-04-18 07:56:00	1903	mergeCols1	1.0.1	1902	addValue	1.0.0
158	2013-04-18 07:56:00	1904	Cut1	1.0.1	1903	mergeCols1	1.0.1
160	2013-04-28 20:36:00	1910	sort1		1909	mergeCols1	
160	2013-04-28 20:36:00	1912	methtools_destrand		1911	Cut1	
162	2013-05-17 14:43:00	1927	gops_intersect_1	1.0.0	1922	cshl_awk_tool	1.0.0
162	2013-05-17 14:43:00	1930	Extract genomic DNA 1	2.2.2	1923	gops_subtract_1	1.0.0
162	2013-05-17 14:43:00	1941	Count1	1.0.0	1923	gops_subtract_1	1.0.0
162	2013-05-17 14:43:00	1927	gops_intersect_1	1.0.0	1924	cshl_awk_tool	1.0.0
162	2013-05-17 14:43:00	1924	cshl_awk_tool	1.0.0	1925	get_flanks1	1.0.0
162	2013-05-17 14:43:00	1939	Count1	1.0.0	1927	gops_intersect_1	1.0.0
162	2013-05-17 14:43:00	1930	Extract genomic DNA 1	2.2.2	1929		
162	2013-05-17 14:43:00	1933	tab2fasta	1.1.0	1932	Show beginning1	1.0.0
162	2013-05-17 14:43:00	1936	Show beginning1	1.0.0	1935	fasta2tab	1.1.0
162	2013-05-17 14:43:00	1937	tab2fasta	1.1.0	1936	Show beginning1	1.0.0
162	2013-05-17 14:43:00	1938	meme_meme	1.0.0	1937	tab2fasta	1.1.0
162	2013-05-17 14:43:00	1940	barchart_gnuplot	1.0.0	1939	Count1	1.0.0
164	2013-05-20 16:05:00	1965	bowtie2	0.1	1964		
164	2013-05-20 16:05:00	1966	samtools_rmdup	1.0.0	1965	bowtie2	0.1
164	2013-05-20 16:05:00	1968	bam2wig	1.3	1966	samtools_rmdup	1.0.0
164	2013-05-20 16:05:00	1970	bowtie2	0.1	1969		
164	2013-05-20 16:05:00	1972	bam2wig	1.3	1971	samtools_rmdup	1.0.0
164	2013-05-20 16:05:00	1974	bowtie2	0.1	1973		
164	2013-05-20 16:05:00	1976	bam2wig	1.3	1975	samtools_rmdup	1.0.0
164	2013-05-20 16:05:00	1978	bowtie2	0.1	1977		
164	2013-05-20 16:05:00	1980	bam2wig	1.3	1979	samtools_rmdup	1.0.0
164	2013-05-20 16:05:00	1983	samtools_rmdup	1.0.0	1982	bowtie2	0.1
164	2013-05-20 16:05:00	1984	bam2wig	1.3	1983	samtools_rmdup	1.0.0
165	2013-05-23 17:21:00	1986	toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1		1985		
165	2013-05-23 17:21:00	1986	toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1		1987		
165	2013-05-23 17:21:00	1992	toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1		1991		
165	2013-05-23 17:21:00	1992	toolshed.g2.bx.psu.edu/repos/bjoern-gruening/trim_galore/trim_galore/0.2.4.1		1993