comparison data_manager_conf.xml @ 2:5558f74bd296 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_diamond_database_builder commit 75abf7d4b23ed7ae8abce80609d81b20bc882863"

1:5a0d0bee4f8d

<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/data_manager_diamond_database_builder.xml" id="diamond_database_builder" version="0.0.1">
        <data_table name="diamond_database">
            <output>
                <column name="value" />
                <column name="name" />
                <column name="db_path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <!-- <source>${db_path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">diamond_database/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/diamond_database/${value}/${db_path}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>

2:5558f74bd296

<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/data_manager_diamond_database_builder.xml" id="diamond_database_builder" version="0.0.3">
        <data_table name="diamond_database">
            <output>
                <column name="value" />
                <column name="name" />
                <column name="db_path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">diamond_database/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/diamond_database/${value}/${db_path}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>