Mercurial > repos > bgruening > data_manager_motus
comparison data_manager_conf.xml @ 0:0370fe3cf518 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/ commit f42263c2875a78500f141027803a38606ecb0f14
author | bgruening |
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date | Thu, 10 Oct 2024 11:00:40 +0000 |
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-1:000000000000 | 0:0370fe3cf518 |
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1 <?xml version="1.0"?> | |
2 <data_managers> | |
3 | |
4 <data_manager tool_file="data_manager/motus_db_fetcher.xml" id="motus_db_fetcher"> | |
5 <data_table name="motus_db_versioned"> | |
6 <output> | |
7 <column name="value" /> | |
8 <column name="version" /> | |
9 <column name="name" /> | |
10 <column name="path" output_ref="out_file" > | |
11 <move type="directory" relativize_symlinks="True"> | |
12 <source>${path}</source> | |
13 <!-- the /db_mOTU path is important since motus looks for a folder named like this --> | |
14 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">motus_database/${value}/db_mOTU</target> | |
15 </move> | |
16 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/motus_database/${value}/db_mOTU</value_translation> | |
17 <value_translation type="function">abspath</value_translation> | |
18 </column> | |
19 </output> | |
20 </data_table> | |
21 </data_manager> | |
22 | |
23 </data_managers> |