view data_manager_conf.xml @ 0:0370fe3cf518 draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/ commit f42263c2875a78500f141027803a38606ecb0f14
author bgruening
date Thu, 10 Oct 2024 11:00:40 +0000
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<?xml version="1.0"?>
<data_managers>

    <data_manager tool_file="data_manager/motus_db_fetcher.xml" id="motus_db_fetcher">
        <data_table name="motus_db_versioned">
            <output>
                <column name="value" />
                <column name="version" />
                <column name="name" />
                <column name="path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <source>${path}</source>
                        <!-- the /db_mOTU path is important since motus looks for a folder named like this  -->
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">motus_database/${value}/db_mOTU</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/motus_database/${value}/db_mOTU</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>

</data_managers>