Mercurial > repos > bgruening > data_manager_motus
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/ commit f42263c2875a78500f141027803a38606ecb0f14
author | bgruening |
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date | Thu, 10 Oct 2024 11:00:40 +0000 |
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# Serve locally * Install conda/mamba ``` mamba create -n planemo-env python=3.7 mamba activate planemo-env pip install -U planemo ``` ## Run DM togehter with tool ``` cd <DM-path>/motus-DM planemo serve data_manager/motus_db_fetcher.xml <motus_profiler PATH>/motus_profiler.xml --biocontainers --galaxy_root ~/git/galaxy ``` ## Check if tool and DM work together In Galaxy go to: * Admin * Local Data * Check if DM is in **Installed Data Managers** * Click it * Run the tool with Database type 3.1.0 * Admin * Data Tables * motus_db_versioned * Check if new table was made * Go to the tool * Check if new table can be found by: `A pre-installed mOTUs database`