Mercurial > repos > bgruening > data_manager_sylph_database
annotate data_manager_conf.xml @ 0:130224fe2d18 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
| author | bgruening |
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| date | Fri, 23 May 2025 09:48:30 +0000 |
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| rev | line source |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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1 <?xml version="1.0"?> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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2 <data_managers> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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3 <data_manager tool_file="data_manager/data_manager_sylph_database.xml" id="data_manager_sylph_database"> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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4 <data_table name="sylph_databases"> <!-- Defines a Data Table to be modified. --> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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5 <output> <!-- Handle the output of the Data Manager Tool --> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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6 <column name="value"/> <!-- columns that are going to be specified by the Data Manager Tool --> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
diff
changeset
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7 <column name="name"/> <!-- columns that are going to be specified by the Data Manager Tool --> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
diff
changeset
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8 <column name="path" output_ref="out_file"> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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9 <move type="file"> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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10 <source>${path}</source> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">sylph/${path}</target> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
diff
changeset
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12 </move> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
diff
changeset
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/sylph/${path}</value_translation> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
diff
changeset
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14 <value_translation type="function">abspath</value_translation> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
diff
changeset
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15 </column> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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16 <column name="clade"/> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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17 <column name="sylph_tax_identifier"/> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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18 <column name="version"/> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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19 </output> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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20 </data_table> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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21 </data_manager> |
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130224fe2d18
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
parents:
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changeset
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22 </data_managers> |
