annotate data_manager_conf.xml @ 0:7862ca465c6b draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
author bgruening
date Fri, 23 May 2025 09:48:43 +0000
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7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
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1 <?xml version="1.0"?>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
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2 <data_managers>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
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3 <data_manager tool_file="data_manager/data_manager_sylph_tax_database.xml" id="data_manager_sylph_tax_database">
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
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4 <data_table name="sylph_tax_database"> <!-- Defines a Data Table to be modified. -->
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
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5 <output> <!-- Handle the output of the Data Manager Tool -->
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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6 <column name="value"/> <!-- columns that are going to be specified by the Data Manager Tool -->
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
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7 <column name="name"/> <!-- columns that are going to be specified by the Data Manager Tool -->
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
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8 <column name="path" output_ref="out_file">
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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9 <move type="directory">
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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10 <source>${path}</source>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">sylph_tax/${path}</target>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
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12 </move>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/sylph_tax/${path}</value_translation>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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14 <value_translation type="function">abspath</value_translation>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
bgruening
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15 </column>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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16 <column name="version"/>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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17 </output>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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18 </data_table>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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19 </data_manager>
7862ca465c6b planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/data_managers/data_manager_sylph_tax_database commit 6ac2834ca0a21512c9986e2fb8d0dcda1c4b0e18
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20 </data_managers>