Mercurial > repos > bgruening > deeptools_bam_coverage

diff deepTools_macros.xml @ 24:0e143b4c3987 draft
planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 6f68c67a609ee0ee720f7c6e197fe37ecd940b57
author: bgruening
date: Tue, 02 Apr 2019 08:19:06 -0400
parents: fe7cc56090ea
children: 7a7fd0f5f15d
--- a/deepTools_macros.xml	Wed Feb 20 08:04:46 2019 -0500
+++ b/deepTools_macros.xml	Tue Apr 02 08:19:06 2019 -0400
@@ -1,10 +1,10 @@
 <macros>
 
     <token name="@THREADS@">--numberOfProcessors "\${GALAXY_SLOTS:-4}"</token>
-    <token name="@WRAPPER_VERSION@">3.2.0.0</token>
+    <token name="@WRAPPER_VERSION@">3.2.1.0</token>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="3.2.0">deeptools</requirement>
+            <requirement type="package" version="3.2.1">deeptools</requirement>
             <requirement type="package" version="1.9">samtools</requirement>
         </requirements>
         <expand macro="stdio" />
@@ -650,6 +650,14 @@
                  (default: False)" />
     </xml>
 
+    <xml name="skipZeroOverZero">
+        <param argument="--skipZeroOverZero" type="select" label="Skip bins of no coverage"
+            help="Skip bins where BOTH files lack coverage.">
+            <option value="" selected="true">No</option>
+            <option value="--skipZeroOverZero">Yes, skip them.</option>
+        </param>
+    </xml>
+
     <xml name="exactScaling">
         <param argument="--exactScaling" type="boolean" truevalue="--exactScaling" falsevalue="" checked="False"
             label="Compute an exact scaling factor"