comparison computeMatrix.xml @ 17:79bc5d836c75 draft

planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit b1f975422b307927bbbe245d57609e9464d5d5c8-dirty

16:38b63f7f8f7a

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This tool prepares an intermediate file (a gzipped table of values)
that contains scores associated with genomic regions.
The regions can either be scaled to the same size (using the ``scale-regions`` mode) or you can choose the start, end, or center of each region as the focus point for the score calculations.
For more details, check out the explanation `here <file:///Users/frd2007/Documents/MPI/deepTools/docs/_build/html/content/tools/computeMatrix.html#details>`_.

The intermediate file produced by ``computeMatrix`` is meant to be used with ``plotHeatmap`` and ``plotProfile``.
See the descriptions of ``plotHeatmap`` and ``plotProfile`` for example plots.

.. image:: $PATH_TO_IMAGES/computeMatrix_overview.png

17:79bc5d836c75

----------------

This tool prepares an intermediate file (a gzipped table of values)
that contains scores associated with genomic regions.
The regions can either be scaled to the same size (using the ``scale-regions`` mode) or you can choose the start, end, or center of each region as the focus point for the score calculations.
For more details, check out the explanation `here <https://deeptools.readthedocs.io/en/latest/content/tools/computeMatrix.html#details>`_.

The intermediate file produced by ``computeMatrix`` is meant to be used with ``plotHeatmap`` and ``plotProfile``.
See the descriptions of ``plotHeatmap`` and ``plotProfile`` for example plots.

.. image:: $PATH_TO_IMAGES/computeMatrix_overview.png