# HG changeset patch # User bgruening # Date 1485251981 18000 # Node ID 6b592142ce93de7b8976dfdefcf7218b5e0b9090 # Parent 6f334c8bd52f65274e0e365992544c5a91e438c2 planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 999ec5d9b5882702497d8117a7d26536a67e19ca diff -r 6f334c8bd52f -r 6b592142ce93 deepTools_macros.xml --- a/deepTools_macros.xml Mon Dec 05 08:12:43 2016 -0500 +++ b/deepTools_macros.xml Tue Jan 24 04:59:41 2017 -0500 @@ -98,11 +98,11 @@ --numberOfProcessors "\${GALAXY_SLOTS:-4}" - 2.4.1 + 2.4.2 python - deeptools + deeptools @@ -299,7 +299,7 @@ - + @@ -450,10 +450,10 @@ #end for #else: #for $counter, $f in enumerate($multibam_conditional.multibam_repeats): - ln -s "${f.bamfile}" "./${counter}.bam" && - ln -s "${f.bamfile.metadata.bam_index}" "./${counter}.bam.bai" && + ln -s "${f.bamfiles}" "./${counter}.bam" && + ln -s "${f.bamfiles.metadata.bam_index}" "./${counter}.bam.bai" && #silent $files.append('%s.bam' % $counter) - #silent $labels.append("'%s'" % ($f.bamfile.display_name)) + #silent $labels.append("'%s'" % ($f.bamfiles.display_name)) #end for #end if ]]> @@ -471,9 +471,9 @@ #end for #else: #for $counter, $f in enumerate($multibigwig_conditional.multibigwig_repeats): - ln -s "${f.bigwig}" "${counter}.bw" && + ln -s "${f.bigwigfiles}" "${counter}.bw" && #silent $files.append('%s.bw' % $counter) - #silent $labels.append("'%s'" % ($f.bigwig.display_name)) + #silent $labels.append("'%s'" % ($f.bigwigfiles.display_name)) #end for #end if ]]> diff -r 6f334c8bd52f -r 6b592142ce93 repository_dependencies.xml --- a/repository_dependencies.xml Mon Dec 05 08:12:43 2016 -0500 +++ b/repository_dependencies.xml Tue Jan 24 04:59:41 2017 -0500 @@ -1,4 +1,4 @@ - + diff -r 6f334c8bd52f -r 6b592142ce93 tool_dependencies.xml --- a/tool_dependencies.xml Mon Dec 05 08:12:43 2016 -0500 +++ b/tool_dependencies.xml Tue Jan 24 04:59:41 2017 -0500 @@ -3,7 +3,7 @@ - - + +