Mercurial > repos > bgruening > deeptools_plot_correlation
comparison plotCorrelation.xml @ 2:fcb4e6e95544 draft
planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 7150f0c106abd56920767518cc331ef6e4e7f439
| author | bgruening |
|---|---|
| date | Thu, 18 Feb 2016 11:50:18 -0500 |
| parents | 0ed13872209b |
| children | df65a17fb5d1 |
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| 1:0ed13872209b | 2:fcb4e6e95544 |
|---|---|
| 73 <test> | 73 <test> |
| 74 <param name="corData" value="multiBamSummary_result1.npz" ftype="deeptools_coverage_matrix" /> | 74 <param name="corData" value="multiBamSummary_result1.npz" ftype="deeptools_coverage_matrix" /> |
| 75 <param name="outFileFormat" value="png" /> | 75 <param name="outFileFormat" value="png" /> |
| 76 <param name="outFileCorMatrix" value="True" /> | 76 <param name="outFileCorMatrix" value="True" /> |
| 77 <output name="matrix" file="plotCorrelation_result1.tabular" ftype="tabular" /> | 77 <output name="matrix" file="plotCorrelation_result1.tabular" ftype="tabular" /> |
| 78 <output name="outFileName" file="plotCorrelation_result1.png" ftype="png" compare="sim_size" delta="100" /> | 78 <output name="outFileName" file="plotCorrelation_result1.png" ftype="png" compare="sim_size" delta="200" /> |
| 79 </test> | 79 </test> |
| 80 <test> | 80 <test> |
| 81 <param name="corData" value="multiBamSummary_result1.npz" ftype="deeptools_coverage_matrix" /> | 81 <param name="corData" value="multiBamSummary_result1.npz" ftype="deeptools_coverage_matrix" /> |
| 82 <param name="outFileFormat" value="png" /> | 82 <param name="outFileFormat" value="png" /> |
| 83 <param name="whatToPlot" value="scatterplot" /> | 83 <param name="whatToPlot" value="scatterplot" /> |
| 84 <param name="removeOutliers" value="True" /> | 84 <param name="removeOutliers" value="True" /> |
| 85 <param name="plotTitle" value="Test Plot" /> | 85 <param name="plotTitle" value="Test Plot" /> |
| 86 <output name="outFileName" file="plotCorrelation_result2.png" ftpye="png" compare="sim_size" delta="100" /> | 86 <output name="outFileName" file="plotCorrelation_result2.png" ftpye="png" compare="sim_size" delta="200" /> |
| 87 </test> | 87 </test> |
| 88 </tests> | 88 </tests> |
| 89 <help> | 89 <help> |
| 90 <![CDATA[ | 90 <![CDATA[ |
| 91 What it does | 91 What it does |