Mercurial > repos > bgruening > deeptools_plot_heatmap
comparison plotHeatmap.xml @ 19:010e58e9d822 draft
planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 5a01e3a370130f32a82d5436504371ed95be1754
| author | bgruening |
|---|---|
| date | Thu, 05 Apr 2018 10:59:22 -0400 |
| parents | 0d6dfbd66443 |
| children | 6e4c17379a40 |
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| 18:89ee34ce72c9 | 19:010e58e9d822 |
|---|---|
| 6 </macros> | 6 </macros> |
| 7 <expand macro="requirements"/> | 7 <expand macro="requirements"/> |
| 8 <command> | 8 <command> |
| 9 <![CDATA[ | 9 <![CDATA[ |
| 10 @BINARY@ | 10 @BINARY@ |
| 11 --matrixFile "$matrixFile" | 11 --matrixFile '$matrixFile' |
| 12 --outFileName "$outFileName" | 12 --outFileName '$outFileName' |
| 13 | 13 |
| 14 #if $output.showOutputSettings == "yes" | 14 #if $output.showOutputSettings == "yes" |
| 15 --plotFileFormat "$output.outFileFormat" | 15 --plotFileFormat '$output.outFileFormat' |
| 16 | 16 |
| 17 #if $outFileNameMatrix: | 17 #if $outFileNameMatrix: |
| 18 --outFileNameMatrix "$outFileNameMatrix" | 18 --outFileNameMatrix '$outFileNameMatrix' |
| 19 #end if | 19 #end if |
| 20 | 20 |
| 21 #if $outFileSortedRegions: | 21 #if $outFileSortedRegions: |
| 22 --outFileSortedRegions "$outFileSortedRegions" | 22 --outFileSortedRegions '$outFileSortedRegions' |
| 23 #end if | 23 #end if |
| 24 | 24 |
| 25 #if $output.dpi: | 25 #if $output.dpi: |
| 26 --dpi "$output.dpi" | 26 --dpi '$output.dpi' |
| 27 #end if | 27 #end if |
| 28 #else | 28 #else |
| 29 --plotFileFormat 'png' | 29 --plotFileFormat 'png' |
| 30 #end if | 30 #end if |
| 31 | 31 |