# HG changeset patch
# User bgruening
# Date 1485252017 18000
# Node ID 6178c2e448eb2bdda9a2aed2894e2b1d0d200d51
# Parent 336225303945764e5aa0eaa57e82893a82f17af1
planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 999ec5d9b5882702497d8117a7d26536a67e19ca
diff -r 336225303945 -r 6178c2e448eb deepTools_macros.xml
--- a/deepTools_macros.xml Mon Dec 05 08:13:06 2016 -0500
+++ b/deepTools_macros.xml Tue Jan 24 05:00:17 2017 -0500
@@ -98,11 +98,11 @@
--numberOfProcessors "\${GALAXY_SLOTS:-4}"
- 2.4.1
+ 2.4.2
python
- deeptools
+ deeptools
@@ -299,7 +299,7 @@
-
+
@@ -450,10 +450,10 @@
#end for
#else:
#for $counter, $f in enumerate($multibam_conditional.multibam_repeats):
- ln -s "${f.bamfile}" "./${counter}.bam" &&
- ln -s "${f.bamfile.metadata.bam_index}" "./${counter}.bam.bai" &&
+ ln -s "${f.bamfiles}" "./${counter}.bam" &&
+ ln -s "${f.bamfiles.metadata.bam_index}" "./${counter}.bam.bai" &&
#silent $files.append('%s.bam' % $counter)
- #silent $labels.append("'%s'" % ($f.bamfile.display_name))
+ #silent $labels.append("'%s'" % ($f.bamfiles.display_name))
#end for
#end if
]]>
@@ -471,9 +471,9 @@
#end for
#else:
#for $counter, $f in enumerate($multibigwig_conditional.multibigwig_repeats):
- ln -s "${f.bigwig}" "${counter}.bw" &&
+ ln -s "${f.bigwigfiles}" "${counter}.bw" &&
#silent $files.append('%s.bw' % $counter)
- #silent $labels.append("'%s'" % ($f.bigwig.display_name))
+ #silent $labels.append("'%s'" % ($f.bigwigfiles.display_name))
#end for
#end if
]]>
diff -r 336225303945 -r 6178c2e448eb plotProfiler.xml
--- a/plotProfiler.xml Mon Dec 05 08:13:06 2016 -0500
+++ b/plotProfiler.xml Tue Jan 24 05:00:17 2017 -0500
@@ -149,7 +149,7 @@
label="Labels for the regions plotted in the heatmap"
help="If more than one region is being plotted a list of labels separated by space is required.
If a label itself contains a space, then quotes are needed.
- For example, label_1, "label 2"" />
+ For example, label_1 "label 2"" />
-
+
diff -r 336225303945 -r 6178c2e448eb tool_dependencies.xml
--- a/tool_dependencies.xml Mon Dec 05 08:13:06 2016 -0500
+++ b/tool_dependencies.xml Tue Jan 24 05:00:17 2017 -0500
@@ -3,7 +3,7 @@
-
-
+
+