Mercurial > repos > bgruening > diamond
comparison test-data/diamond_results.sam @ 12:60f307965815 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 62db819c1db857d3fba94dc4e290ee0f50f7928d
author | iuc |
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date | Mon, 03 Feb 2025 16:01:01 +0000 |
parents | 1e3323a44643 |
children |
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11:e8ac2b53f262 | 12:60f307965815 |
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1 @HD VN:1.5 SO:query | 1 @HD VN:1.5 SO:query |
2 @PG PN:DIAMOND VN:2.0.15 CL:diamond view --threads 1 --daa input.daa --outfmt 101 --salltitles --sallseqid --out /tmp/tmpuqw24dac/files/e/4/b/dataset_e4b47568-a2e4-4ec1-ac5f-f266085686a4.dat --top 0 --forwardonly --compress 0 | 2 @PG PN:DIAMOND VN:2.1.11 CL:diamond view --threads 1 --daa input.daa --outfmt 101 --out /tmp/tmp61jyo35f/job_working_directory/000/6/outputs/dataset_bb83a399-fa7d-414f-afff-28cb61b3cd8d.dat --top 0 --forwardonly --verbose |
3 @mm BlastP | 3 @mm BlastP |
4 @CO BlastP-like alignments | 4 @CO BlastP-like alignments |
5 @CO Reporting AS: bitScore, ZR: rawScore, ZE: expected, ZI: percent identity, ZL: reference length, ZF: frame, ZS: query start DNA coordinate | 5 @CO Reporting AS: bitScore, ZR: rawScore, ZE: expected, ZI: percent identity, ZL: reference length, ZF: frame, ZS: query start DNA coordinate |
6 sequence 0 gi|5524211|gb|AAD44166.1| 1 255 94M1D189M * 0 0 LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFILFTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILXXXXXXXALLSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY * AS:i:550 NM:i:1 ZL:i:284 ZR:i:1417 ZE:f:1.44e-205 ZI:i:99 ZF:i:1 ZS:i:1 MD:Z:94^P189 | 6 sequence 0 gi|5524211|gb|AAD44166.1| 1 255 94M1D189M * 0 0 LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFILFTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILXXXXXXXALLSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY * AS:i:550 NM:i:1 ZL:i:284 ZR:i:1417 ZE:f:1.44e-205 ZI:i:99 ZF:i:1 ZS:i:1 MD:Z:94^P189 |