comparison tool_dependencies.xml @ 0:42d20ff5da1b draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna/dotknot commit 1973f3035c10db80883d80847ea254289f5cce2a-dirty

0:42d20ff5da1b

<?xml version="1.0"?>
<tool_dependency>
    <package name="vienna_rna" version="1.8.5">
        <repository changeset_revision="6757330f89cd" name="package_vienna_rna_1_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="dotknot" version="1.3.1">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://github.com/bgruening/download_store/raw/master/dotknot/dotknot_1.3.1.tar.bz2</action>
                <action type="move_directory_files">
                    <source_directory>.</source_directory>
                    <destination_directory>$INSTALL_DIR</destination_directory>
                </action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
                    <environment_variable action="set_to" name="DOTKNOT_ROOT_PATH">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
            <readme>
        
            DotKnot:a heuristic method for pseudoknot prediction in a given RNA sequence.
            See http://dotknot.csse.uwa.edu.au/
        
        </readme>
    </package>
</tool_dependency>