Mercurial > repos > bgruening > dotknot

diff test-data/tmRNA_alignment.fasta @ 0:42d20ff5da1b draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna/dotknot commit 1973f3035c10db80883d80847ea254289f5cce2a-dirty
author bgruening
date Thu, 17 Sep 2015 17:10:07 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/tmRNA_alignment.fasta	Thu Sep 17 17:10:07 2015 -0400
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+>Ecoli-tmRNA
+GGGGCUGAUUCUGGAUUCGACGGGAUUUGCGAAACCCAAGGUGCAUGCCGAGGGGCGGUUGGCCUCGUAAAAAGCCGCAAAAAAUAGUCGCAAACGACGAAAACUACGCUUUAGCAGCUUAAUAACCUGCUUAGAGCCCUCUCUCCCUAGCCUCCGCUCUUAGGACGGGGAUCAAGAGAGGUCAAACCCAAAAGAGAUCGCGUGGAAGCCCUGCCUGGGGUUGAAGCGUUAAAACUUAAUCAGGCUAGUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGCGAAUGUAAAGACUGACUAAGCAUGUAGUACCGAGGAUGUAGGAAUUUCGGACGCGGGUUCAACUCCCGCCAGCUCCACCA
+>Mesoplasma florum tmRNA
+GGGGAUGUCCUGGUUUCGACAGGAUACUCUGGUCAUAUAAUAGCAGUGGUGUGGUAGACCAUAAUACUUCUAGGUUUGAUAAAAUGCAAACAAAAACGAAGAAAACACAAACGAAGUUCCAACAUUUAUGUUAAAUGCUGGACAAGCAAAUUACGCUUUCGCUUAAUUUGACUUAAAUACAAAUAUACGUUUGGCAAUUUUUAAUAGUCUUGGAAUCUGUUAAUUAUUGUACAUACCAAUUCCAAUAGAAAUUAUGAUCGUAAUAAAUAAUUUUGAAACUCAAUUACGGAUGUUAUAUUAGUCUUUUGAUAAUUUUAUUUAAUAUAGCAAAUUAGAAAAUUAUCUAAACUGUAGAAUUUAUAUGAUUCGGUAUUUUGGACGUGGGUUCGAUUCCCACCAUCUCCACCA
+>Thermus thermophilus tmRNA, version 1 {HB8}: 
+GGGGGUGAAACGGUCUCGACGGGGGUCGCCGAGGGCGUGGCUGCGCGCCGAGGUGCGGGUGGCCUCGUAAAAACCCGCAACGGCAUAACUGCCAACACCAACUACGCUCUCGCGGCUUAAUGACCGCGACCUCGCCCGGUAGCCCUGCCGGGGGCUCACCGGAAGCGGGGACACAAACCCGGCUAGCCCGGGGCCACGCCCUCUAACCCCGGGCGAAGCUUGAAGGGGGCUCGCUCCUGGCCGCCCGUCCGCGGGCCAAGCCAGGAGGACACGCGAAACGCGGACUACGCGCGUAGAGGCCCGCCGUAGAGACCUUCGGACGGGGGUUCGACUCCCCCCACCUCCACCA
+>Actinobacillus actinomycetemcomitans tmRNA
+GGGGCUGAUUCUGGAUUCGACGGGAUUGGCGAAGCCCAAGGUGCACGUCGAGGUGCGGUAGGCCUCGUAAAUAAACCGCAAAAAAAUAGUCGCAAACGACGAACAAUACGCUUUAGCAGCUUAAUAACCUGCAUUUAGCCUUCGCUCCCCAGCUUCCGCUCGUAAGACGGGGAUCAAGCGGAGUCAAACCUAAACGAGAUCGUGUGGACGCUUCGGCUUGGAGAUCGAAACACUAAAUUGAAUCAAGCUAGUUUAUUCUUCGCGUGUCUGUCCGCAGGGGAUAAAUGAAGUUAAAGACCAGACUAAACGUGUAGUGCUGAAGGUAGAGUAAUUUCGGACGCGGGUUCAACUCCCGCCAGCUCCACCA
+>marine_actinobacteri.1 AAOB01000009.1/82671-83044
+GGGGAUGAUCGGUUUCGACAUUGCCUGCAAAACUGUGAGAAGCGGGUCGAGAAUGCAGCCUUAUCUCGUUAACGAUGACUGCAAACUAUAAGUGCCAAUUCAAAGCGCACUGACUUCGCCCUCGCUGCCUAAGCGAGCGCACUAAAGAAGUCCGUCAGACCGGGAAUGCUCUCUACCCGGAUCCUGGCGCAAUUUAGAGAGAUUGCUGCGUAGUUACGCCUGAGGGCUACGCGGGACUUGCACUCUGGCUGGGCUUGUUGAUCUAGGUGCUUGUGGCAAAGAUCAGAGCCGAGUAGAACGUCUGCACAAGCUACACCCGUAGAAGGCACAGAAUUACAGCAGUGGACGGGGGUUCAAUUCCCCCCAUCUCCACC
+