diff test-data/ele_pre.asm1_gfastats.txt @ 0:8c99976de71e draft

planemo upload for repository https://github.com/ERGA-consortium/EARs/tree/main commit e9db2e88e55a442d7f8fdb5e8e86330410d2e92d

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/ele_pre.asm1_gfastats.txt	Fri Jun 07 14:23:49 2024 +0000
@@ -0,0 +1,140 @@
++++Assembly summary+++: 
+Expected genome size: 3013249396
+# scaffolds: 973
+Total scaffold length: 3660021265
+Average scaffold length: 3761584.03
+Scaffold N50: 111683922
+Scaffold auN: 121433811.93
+Scaffold L50: 12
+Scaffold NG50: 124780000
+Scaffold auNG: 147498688.47
+Scaffold LG50: 9
+Largest scaffold: 243324329
+Smallest scaffold: 11938
+# contigs: 1101
+Total contig length: 3658146742
+Average contig length: 3322567.43
+Contig N50: 73275821
+Contig auN: 80985913.84
+Contig L50: 16
+Contig NG50: 82586413
+Contig auNG: 98318565.08
+Contig LG50: 12
+Largest contig: 204998129
+Smallest contig: 140
+# gaps in scaffolds: 128
+Total gap length in scaffolds: 1874523
+Average gap length in scaffolds: 14644.71
+Gap N50 in scaffolds: 1310475
+Gap auN in scaffolds: 947429.23
+Gap L50 in scaffolds: 1
+Largest gap in scaffolds: 1310475
+Smallest gap in scaffolds: 13
+Base composition (A:C:G:T): 1064699494:760497093:762136425:1070813730
+GC content %: 41.62
+# soft-masked bases: 0
+# segments: 1101
+Total segment length: 3658146742
+Average segment length: 3322567.43
+# gaps: 128
+# paths: 973
+Scaffold N10: 236160408
+Scaffold N20: 194728383
+Scaffold N30: 141551058
+Scaffold N40: 124780000
+Scaffold N50: 111683922
+Scaffold N60: 92969958
+Scaffold N70: 82406000
+Scaffold N80: 76754748
+Scaffold N90: 6554085
+Scaffold N100: 11938
+Scaffold L10: 2
+Scaffold L20: 4
+Scaffold L30: 6
+Scaffold L40: 9
+Scaffold L50: 12
+Scaffold L60: 15
+Scaffold L70: 19
+Scaffold L80: 24
+Scaffold L90: 35
+Scaffold L100: 973
+Scaffold NG10: 236160408
+Scaffold NG20: 209662331
+Scaffold NG30: 164562945
+Scaffold NG40: 134694077
+Scaffold NG50: 124780000
+Scaffold NG60: 117534258
+Scaffold NG70: 97684049
+Scaffold NG80: 84211173
+Scaffold NG90: 80601974
+Scaffold NG100: 69902989
+Scaffold LG10: 2
+Scaffold LG20: 3
+Scaffold LG30: 5
+Scaffold LG40: 7
+Scaffold LG50: 9
+Scaffold LG60: 11
+Scaffold LG70: 14
+Scaffold LG80: 18
+Scaffold LG90: 21
+Scaffold LG100: 25
+Contig N10: 177989186
+Contig N20: 134382063
+Contig N30: 117534258
+Contig N40: 82586413
+Contig N50: 73275821
+Contig N60: 54864116
+Contig N70: 48431110
+Contig N80: 26563858
+Contig N90: 2992004
+Contig N100: 140
+Contig L10: 2
+Contig L20: 5
+Contig L30: 8
+Contig L40: 12
+Contig L50: 16
+Contig L60: 22
+Contig L70: 29
+Contig L80: 39
+Contig L90: 85
+Contig L100: 1101
+Contig NG10: 177989186
+Contig NG20: 141551058
+Contig NG30: 120144288
+Contig NG40: 89132339
+Contig NG50: 82586413
+Contig NG60: 73275821
+Contig NG70: 63623994
+Contig NG80: 49644639
+Contig NG90: 36506007
+Contig NG100: 19324751
+Contig LG10: 2
+Contig LG20: 4
+Contig LG30: 6
+Contig LG40: 9
+Contig LG50: 12
+Contig LG60: 16
+Contig LG70: 21
+Contig LG80: 26
+Contig LG90: 33
+Contig LG100: 43
+Gap N10: 1310475
+Gap N20: 1310475
+Gap N30: 1310475
+Gap N40: 1310475
+Gap N50: 1310475
+Gap N60: 1310475
+Gap N70: 185666
+Gap N80: 121398
+Gap N90: 72844
+Gap N100: 13
+Gap L10: 1
+Gap L20: 1
+Gap L30: 1
+Gap L40: 1
+Gap L50: 1
+Gap L60: 1
+Gap L70: 2
+Gap L80: 3
+Gap L90: 4
+Gap L100: 128