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view test-data/genomescope_results_summary.txt @ 2:a34826ae0a73 draft

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planemo upload for repository https://github.com/ERGA-consortium/EARs/tree/main commit e293d14e82a903a4cab64dd72dfa3f3798466176
author bgruening
date Fri, 30 Aug 2024 09:27:31 +0000
parents 8c99976de71e
children
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GenomeScope version 2.0
input file = /scratch/ddepanis/Elephant_project/mEleMax1.2/curated/1_evaluation/kmer_profiling/HiFi_trimmed.meryl/merylDB_10000.hist
output directory = /scratch/ddepanis/Elephant_project/mEleMax1.2/curated/1_evaluation/kmer_profiling/HiFi_trimmed.meryl/genomescope/
p = 2
k = 31
name prefix = results

property                      min               max               
Homozygous (aa)               99.739%           99.7476%          
Heterozygous (ab)             0.252443%         0.260993%         
Genome Haploid Length         3,011,504,214 bp  3,013,249,396 bp  
Genome Repeat Length          551,610,389 bp    551,930,050 bp    
Genome Unique Length          2,459,893,825 bp  2,461,319,346 bp  
Model Fit                     83.6025%          98.1859%          
Read Error Rate               0.16852%          0.16852%