comparison test-data/test_07_stats.tabular @ 0:5799092ffdff draft

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 115f451c7c9e7e30fd1b8df26bfc5362832a6eb7"
author bgruening
date Wed, 09 Mar 2022 10:29:20 +0000
parents
children 2b8b4cacb83d
comparison
equal deleted inserted replaced
-1:000000000000 0:5799092ffdff
1 +++Summary+++:
2 # scaffolds: 3
3 Total scaffold length: 419576
4 Average scaffold length: 139858.67
5 Scaffold N50: 417540
6 Scaffold auN: 415520.91
7 Scaffold L50: 1
8 Largest scaffold: 417540
9 # contigs: 6
10 Total contig length: 419573
11 Average contig length: 69928.83
12 Contig N50: 416949
13 Contig auN: 414345.81
14 Contig L50: 1
15 Largest contig: 416949
16 # gaps: 3
17 Total gap length: 3
18 Average gap length: 1.00
19 Gap N50: 1
20 Gap auN: 1.00
21 Gap L50: 2
22 Largest gap: 1
23 Base composition (ACGT): 102144, 112550, 104859, 100020
24 GC content %: 51.82
25 # soft-masked bases: 0
26 # paths: 3
27 Scaffold N10: 417540
28 Scaffold N20: 417540
29 Scaffold N30: 417540
30 Scaffold N40: 417540
31 Scaffold N50: 417540
32 Scaffold N60: 417540
33 Scaffold N70: 417540
34 Scaffold N80: 417540
35 Scaffold N90: 417540
36 Scaffold N100: 356
37 Scaffold L10: 1
38 Scaffold L20: 1
39 Scaffold L30: 1
40 Scaffold L40: 1
41 Scaffold L50: 1
42 Scaffold L60: 1
43 Scaffold L70: 1
44 Scaffold L80: 1
45 Scaffold L90: 1
46 Scaffold L100: 3
47 Contig N10: 416949
48 Contig N20: 416949
49 Contig N30: 416949
50 Contig N40: 416949
51 Contig N50: 416949
52 Contig N60: 416949
53 Contig N70: 416949
54 Contig N80: 416949
55 Contig N90: 416949
56 Contig N100: 101
57 Contig L10: 1
58 Contig L20: 1
59 Contig L30: 1
60 Contig L40: 1
61 Contig L50: 1
62 Contig L60: 1
63 Contig L70: 1
64 Contig L80: 1
65 Contig L90: 1
66 Contig L100: 6
67 Gap N10: 1
68 Gap N20: 1
69 Gap N30: 1
70 Gap N40: 1
71 Gap N50: 1
72 Gap N60: 1
73 Gap N70: 1
74 Gap N80: 1
75 Gap N90: 1
76 Gap N100: 1
77 Gap L10: 1
78 Gap L20: 1
79 Gap L30: 1
80 Gap L40: 2
81 Gap L50: 2
82 Gap L60: 2
83 Gap L70: 3
84 Gap L80: 3
85 Gap L90: 3
86 Gap L100: 3