Mercurial > repos > bgruening > gfastats
comparison test-data/test_11_stats.tabular @ 2:ad1149b4f795 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 0c9612e0257a872892894530669785d1e02aaacc
| author | bgruening |
|---|---|
| date | Wed, 01 Jun 2022 15:15:57 +0000 |
| parents | |
| children | 8ccbf07a5433 |
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| 1:2b8b4cacb83d | 2:ad1149b4f795 |
|---|---|
| 1 # scaffolds 1 | |
| 2 Total scaffold length 1680 | |
| 3 Average scaffold length 1680.00 | |
| 4 Scaffold N50 1680 | |
| 5 Scaffold auN 1680.00 | |
| 6 Scaffold L50 1 | |
| 7 Largest scaffold 1680 | |
| 8 Total contig length 1679 | |
| 9 Average contig length 839.50 | |
| 10 Contig N50 922 | |
| 11 Contig auN 847.61 | |
| 12 Contig L50 1 | |
| 13 Largest contig 922 | |
| 14 # gaps in scaffolds 1 | |
| 15 Total gap length in scaffolds 1 | |
| 16 Average gap length in scaffolds 1.00 | |
| 17 Gap N50 in scaffolds 1 | |
| 18 Gap auN in scaffolds 1.00 | |
| 19 Gap L50 in scaffolds 1 | |
| 20 Largest gap in scaffolds 1 | |
| 21 Base composition (A:C:G:T) 388:497:402:392 | |
| 22 GC content % 53.54 | |
| 23 # soft-masked bases 0 | |
| 24 # segments 2 | |
| 25 Total segment length 1679 | |
| 26 Average segment length 839.50 | |
| 27 # gaps 1 | |
| 28 # paths 1 | |
| 29 Scaffold N10 1680 | |
| 30 Scaffold N20 1680 | |
| 31 Scaffold N30 1680 | |
| 32 Scaffold N40 1680 | |
| 33 Scaffold N50 1680 | |
| 34 Scaffold N60 1680 | |
| 35 Scaffold N70 1680 | |
| 36 Scaffold N80 1680 | |
| 37 Scaffold N90 1680 | |
| 38 Scaffold N100 1680 | |
| 39 Scaffold L10 1 | |
| 40 Scaffold L20 1 | |
| 41 Scaffold L30 1 | |
| 42 Scaffold L40 1 | |
| 43 Scaffold L50 1 | |
| 44 Scaffold L60 1 | |
| 45 Scaffold L70 1 | |
| 46 Scaffold L80 1 | |
| 47 Scaffold L90 1 | |
| 48 Scaffold L100 1 | |
| 49 Contig N10 922 | |
| 50 Contig N20 922 | |
| 51 Contig N30 922 | |
| 52 Contig N40 922 | |
| 53 Contig N50 922 | |
| 54 Contig N60 757 | |
| 55 Contig N70 757 | |
| 56 Contig N80 757 | |
| 57 Contig N90 757 | |
| 58 Contig N100 757 | |
| 59 Contig L10 1 | |
| 60 Contig L20 1 | |
| 61 Contig L30 1 | |
| 62 Contig L40 1 | |
| 63 Contig L50 1 | |
| 64 Contig L60 2 | |
| 65 Contig L70 2 | |
| 66 Contig L80 2 | |
| 67 Contig L90 2 | |
| 68 Contig L100 2 | |
| 69 Gap N10 1 | |
| 70 Gap N20 1 | |
| 71 Gap N30 1 | |
| 72 Gap N40 1 | |
| 73 Gap N50 1 | |
| 74 Gap N60 1 | |
| 75 Gap N70 1 | |
| 76 Gap N80 1 | |
| 77 Gap N90 1 | |
| 78 Gap N100 1 | |
| 79 Gap L10 1 | |
| 80 Gap L20 1 | |
| 81 Gap L30 1 | |
| 82 Gap L40 1 | |
| 83 Gap L50 1 | |
| 84 Gap L60 1 | |
| 85 Gap L70 1 | |
| 86 Gap L80 1 | |
| 87 Gap L90 1 | |
| 88 Gap L100 1 |