Mercurial > repos > bgruening > gfastats
diff test-data/test_04_stats.tabular @ 1:2b8b4cacb83d draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 8a11d204376d9daea8026f1b33a53f40fc693bf2"
| author | bgruening |
|---|---|
| date | Mon, 25 Apr 2022 09:38:18 +0000 |
| parents | 5799092ffdff |
| children | 8ccbf07a5433 |
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--- a/test-data/test_04_stats.tabular Wed Mar 09 10:29:20 2022 +0000 +++ b/test-data/test_04_stats.tabular Mon Apr 25 09:38:18 2022 +0000 @@ -9,7 +9,6 @@ Scaffold auNG 290571.00 Scaffold LG50 1 Largest scaffold 417540 -# contigs 6 Total contig length 419573 Average contig length 69928.83 Contig N50 416949 @@ -19,16 +18,20 @@ Contig auNG 289747.19 Contig LG50 1 Largest contig 416949 -# gaps 3 -Total gap length 3 -Average gap length 1.00 -Gap N50 1 -Gap auN 1.00 -Gap L50 2 -Largest gap 1 -Base composition (ACGT) 102144, 112550, 104859, 100020 +# gaps in scaffolds 3 +Total gap length in scaffolds 3 +Average gap length in scaffolds 1.00 +Gap N50 in scaffolds 1 +Gap auN in scaffolds 1.00 +Gap L50 in scaffolds 2 +Largest gap in scaffolds 1 +Base composition (A:C:G:T) 102144:112550:104859:100020 GC content % 51.82 # soft-masked bases 0 +# segments 6 +Total segment length 419573 +Average segment length 69928.83 +# gaps 3 # paths 3 Scaffold N10 417540 Scaffold N20 417540