Mercurial > repos > bgruening > gfastats
diff test-data/test_07_stats.tabular @ 0:5799092ffdff draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 115f451c7c9e7e30fd1b8df26bfc5362832a6eb7"
author | bgruening |
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date | Wed, 09 Mar 2022 10:29:20 +0000 |
parents | |
children | 2b8b4cacb83d |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_07_stats.tabular Wed Mar 09 10:29:20 2022 +0000 @@ -0,0 +1,86 @@ ++++Summary+++: +# scaffolds: 3 +Total scaffold length: 419576 +Average scaffold length: 139858.67 +Scaffold N50: 417540 +Scaffold auN: 415520.91 +Scaffold L50: 1 +Largest scaffold: 417540 +# contigs: 6 +Total contig length: 419573 +Average contig length: 69928.83 +Contig N50: 416949 +Contig auN: 414345.81 +Contig L50: 1 +Largest contig: 416949 +# gaps: 3 +Total gap length: 3 +Average gap length: 1.00 +Gap N50: 1 +Gap auN: 1.00 +Gap L50: 2 +Largest gap: 1 +Base composition (ACGT): 102144, 112550, 104859, 100020 +GC content %: 51.82 +# soft-masked bases: 0 +# paths: 3 +Scaffold N10: 417540 +Scaffold N20: 417540 +Scaffold N30: 417540 +Scaffold N40: 417540 +Scaffold N50: 417540 +Scaffold N60: 417540 +Scaffold N70: 417540 +Scaffold N80: 417540 +Scaffold N90: 417540 +Scaffold N100: 356 +Scaffold L10: 1 +Scaffold L20: 1 +Scaffold L30: 1 +Scaffold L40: 1 +Scaffold L50: 1 +Scaffold L60: 1 +Scaffold L70: 1 +Scaffold L80: 1 +Scaffold L90: 1 +Scaffold L100: 3 +Contig N10: 416949 +Contig N20: 416949 +Contig N30: 416949 +Contig N40: 416949 +Contig N50: 416949 +Contig N60: 416949 +Contig N70: 416949 +Contig N80: 416949 +Contig N90: 416949 +Contig N100: 101 +Contig L10: 1 +Contig L20: 1 +Contig L30: 1 +Contig L40: 1 +Contig L50: 1 +Contig L60: 1 +Contig L70: 1 +Contig L80: 1 +Contig L90: 1 +Contig L100: 6 +Gap N10: 1 +Gap N20: 1 +Gap N30: 1 +Gap N40: 1 +Gap N50: 1 +Gap N60: 1 +Gap N70: 1 +Gap N80: 1 +Gap N90: 1 +Gap N100: 1 +Gap L10: 1 +Gap L20: 1 +Gap L30: 1 +Gap L40: 2 +Gap L50: 2 +Gap L60: 2 +Gap L70: 3 +Gap L80: 3 +Gap L90: 3 +Gap L100: 3