diff test-data/test_07_stats.tabular @ 0:5799092ffdff draft

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 115f451c7c9e7e30fd1b8df26bfc5362832a6eb7"
author bgruening
date Wed, 09 Mar 2022 10:29:20 +0000
parents
children 2b8b4cacb83d
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_07_stats.tabular	Wed Mar 09 10:29:20 2022 +0000
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++++Summary+++: 
+# scaffolds: 3
+Total scaffold length: 419576
+Average scaffold length: 139858.67
+Scaffold N50: 417540
+Scaffold auN: 415520.91
+Scaffold L50: 1
+Largest scaffold: 417540
+# contigs: 6
+Total contig length: 419573
+Average contig length: 69928.83
+Contig N50: 416949
+Contig auN: 414345.81
+Contig L50: 1
+Largest contig: 416949
+# gaps: 3
+Total gap length: 3
+Average gap length: 1.00
+Gap N50: 1
+Gap auN: 1.00
+Gap L50: 2
+Largest gap: 1
+Base composition (ACGT): 102144, 112550, 104859, 100020
+GC content %: 51.82
+# soft-masked bases: 0
+# paths: 3
+Scaffold N10: 417540
+Scaffold N20: 417540
+Scaffold N30: 417540
+Scaffold N40: 417540
+Scaffold N50: 417540
+Scaffold N60: 417540
+Scaffold N70: 417540
+Scaffold N80: 417540
+Scaffold N90: 417540
+Scaffold N100: 356
+Scaffold L10: 1
+Scaffold L20: 1
+Scaffold L30: 1
+Scaffold L40: 1
+Scaffold L50: 1
+Scaffold L60: 1
+Scaffold L70: 1
+Scaffold L80: 1
+Scaffold L90: 1
+Scaffold L100: 3
+Contig N10: 416949
+Contig N20: 416949
+Contig N30: 416949
+Contig N40: 416949
+Contig N50: 416949
+Contig N60: 416949
+Contig N70: 416949
+Contig N80: 416949
+Contig N90: 416949
+Contig N100: 101
+Contig L10: 1
+Contig L20: 1
+Contig L30: 1
+Contig L40: 1
+Contig L50: 1
+Contig L60: 1
+Contig L70: 1
+Contig L80: 1
+Contig L90: 1
+Contig L100: 6
+Gap N10: 1
+Gap N20: 1
+Gap N30: 1
+Gap N40: 1
+Gap N50: 1
+Gap N60: 1
+Gap N70: 1
+Gap N80: 1
+Gap N90: 1
+Gap N100: 1
+Gap L10: 1
+Gap L20: 1
+Gap L30: 1
+Gap L40: 2
+Gap L50: 2
+Gap L60: 2
+Gap L70: 3
+Gap L80: 3
+Gap L90: 3
+Gap L100: 3