Mercurial > repos > bgruening > gfastats
view test-data/test_11_stats.tabular @ 9:f4a3eff8ab85 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 7de96873dbc693ce72d8d0aa734d1272a3d0f456
author | bgruening |
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date | Wed, 06 Nov 2024 11:28:41 +0000 |
parents | 8ccbf07a5433 |
children |
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# scaffolds 1 Total scaffold length 1680 Average scaffold length 1680.00 Scaffold N50 1680 Scaffold auN 1680.00 Scaffold L50 1 Largest scaffold 1680 Smallest scaffold 1680 # contigs 2 Total contig length 1679 Average contig length 839.50 Contig N50 922 Contig auN 847.61 Contig L50 1 Largest contig 922 Smallest contig 757 # gaps in scaffolds 1 Total gap length in scaffolds 1 Average gap length in scaffolds 1.00 Gap N50 in scaffolds 1 Gap auN in scaffolds 1.00 Gap L50 in scaffolds 1 Largest gap in scaffolds 1 Smallest gap in scaffolds 1 Base composition (A:C:G:T) 388:497:402:392 GC content % 53.54 # soft-masked bases 0 # segments 2 Total segment length 1679 Average segment length 839.50 # gaps 1 # paths 1 Scaffold N10 1680 Scaffold N20 1680 Scaffold N30 1680 Scaffold N40 1680 Scaffold N50 1680 Scaffold N60 1680 Scaffold N70 1680 Scaffold N80 1680 Scaffold N90 1680 Scaffold N100 1680 Scaffold L10 1 Scaffold L20 1 Scaffold L30 1 Scaffold L40 1 Scaffold L50 1 Scaffold L60 1 Scaffold L70 1 Scaffold L80 1 Scaffold L90 1 Scaffold L100 1 Contig N10 922 Contig N20 922 Contig N30 922 Contig N40 922 Contig N50 922 Contig N60 757 Contig N70 757 Contig N80 757 Contig N90 757 Contig N100 757 Contig L10 1 Contig L20 1 Contig L30 1 Contig L40 1 Contig L50 1 Contig L60 2 Contig L70 2 Contig L80 2 Contig L90 2 Contig L100 2 Gap N10 1 Gap N20 1 Gap N30 1 Gap N40 1 Gap N50 1 Gap N60 1 Gap N70 1 Gap N80 1 Gap N90 1 Gap N100 1 Gap L10 1 Gap L20 1 Gap L30 1 Gap L40 1 Gap L50 1 Gap L60 1 Gap L70 1 Gap L80 1 Gap L90 1 Gap L100 1