Mercurial > repos > bgruening > gfstats
comparison test-data/test_07_stats.tabular @ 0:5f250ffcb1af draft default tip
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 6ca9363cc4e0da886aab9accd79d52663247af29"
| author | bgruening |
|---|---|
| date | Tue, 08 Mar 2022 21:49:13 +0000 |
| parents | |
| children |
comparison
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| -1:000000000000 | 0:5f250ffcb1af |
|---|---|
| 1 +++Summary+++: | |
| 2 # scaffolds: 3 | |
| 3 Total scaffold length: 419576 | |
| 4 Average scaffold length: 139858.67 | |
| 5 Scaffold N50: 417540 | |
| 6 Scaffold auN: 415520.91 | |
| 7 Scaffold L50: 1 | |
| 8 Largest scaffold: 417540 | |
| 9 # contigs: 6 | |
| 10 Total contig length: 419573 | |
| 11 Average contig length: 69928.83 | |
| 12 Contig N50: 416949 | |
| 13 Contig auN: 414345.81 | |
| 14 Contig L50: 1 | |
| 15 Largest contig: 416949 | |
| 16 # gaps: 3 | |
| 17 Total gap length: 3 | |
| 18 Average gap length: 1.00 | |
| 19 Gap N50: 1 | |
| 20 Gap auN: 1.00 | |
| 21 Gap L50: 2 | |
| 22 Largest gap: 1 | |
| 23 Base composition (ACGT): 102144, 112550, 104859, 100020 | |
| 24 GC content %: 51.82 | |
| 25 # soft-masked bases: 0 | |
| 26 # paths: 3 | |
| 27 Scaffold N10: 417540 | |
| 28 Scaffold N20: 417540 | |
| 29 Scaffold N30: 417540 | |
| 30 Scaffold N40: 417540 | |
| 31 Scaffold N50: 417540 | |
| 32 Scaffold N60: 417540 | |
| 33 Scaffold N70: 417540 | |
| 34 Scaffold N80: 417540 | |
| 35 Scaffold N90: 417540 | |
| 36 Scaffold N100: 356 | |
| 37 Scaffold L10: 1 | |
| 38 Scaffold L20: 1 | |
| 39 Scaffold L30: 1 | |
| 40 Scaffold L40: 1 | |
| 41 Scaffold L50: 1 | |
| 42 Scaffold L60: 1 | |
| 43 Scaffold L70: 1 | |
| 44 Scaffold L80: 1 | |
| 45 Scaffold L90: 1 | |
| 46 Scaffold L100: 3 | |
| 47 Contig N10: 416949 | |
| 48 Contig N20: 416949 | |
| 49 Contig N30: 416949 | |
| 50 Contig N40: 416949 | |
| 51 Contig N50: 416949 | |
| 52 Contig N60: 416949 | |
| 53 Contig N70: 416949 | |
| 54 Contig N80: 416949 | |
| 55 Contig N90: 416949 | |
| 56 Contig N100: 101 | |
| 57 Contig L10: 1 | |
| 58 Contig L20: 1 | |
| 59 Contig L30: 1 | |
| 60 Contig L40: 1 | |
| 61 Contig L50: 1 | |
| 62 Contig L60: 1 | |
| 63 Contig L70: 1 | |
| 64 Contig L80: 1 | |
| 65 Contig L90: 1 | |
| 66 Contig L100: 6 | |
| 67 Gap N10: 1 | |
| 68 Gap N20: 1 | |
| 69 Gap N30: 1 | |
| 70 Gap N40: 1 | |
| 71 Gap N50: 1 | |
| 72 Gap N60: 1 | |
| 73 Gap N70: 1 | |
| 74 Gap N80: 1 | |
| 75 Gap N90: 1 | |
| 76 Gap N100: 1 | |
| 77 Gap L10: 1 | |
| 78 Gap L20: 1 | |
| 79 Gap L30: 1 | |
| 80 Gap L40: 2 | |
| 81 Gap L50: 2 | |
| 82 Gap L60: 2 | |
| 83 Gap L70: 3 | |
| 84 Gap L80: 3 | |
| 85 Gap L90: 3 | |
| 86 Gap L100: 3 |