Mercurial > repos > bgruening > gfstats
comparison test-data/test_03_stats.tabular @ 0:5f250ffcb1af draft default tip
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 6ca9363cc4e0da886aab9accd79d52663247af29"
| author | bgruening |
|---|---|
| date | Tue, 08 Mar 2022 21:49:13 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:5f250ffcb1af |
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| 1 Seq 1 | |
| 2 Header bf06004a-705a-4fe9-942a-2dcabf04766e.1 | |
| 3 Comment | |
| 4 Total segment length 11188 | |
| 5 Base composition (ACGT) 2755, 2648, 2783, 3002 | |
| 6 GC content % 48.54 | |
| 7 # soft-masked bases 0 | |
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| 10 Header 106a7186-c3b0-43dd-8289-34f8a0494fcf.1 | |
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| 13 Base composition (ACGT) 3870, 3700, 3835, 3862 | |
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| 374 GC content % 48.38 | |
| 375 # soft-masked bases 0 | |
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| 378 Header 3cff810f-585b-4233-9596-fb063582cb6f.1 | |
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| 391 # soft-masked bases 0 | |
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| 394 Header 834cd6b9-2700-41bb-a877-4721917e016b.1 | |
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| 396 Total segment length 27298 | |
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| 399 # soft-masked bases 0 | |
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| 407 # soft-masked bases 0 | |
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| 426 Header d4657c21-9a0b-4729-9da9-8e2c1123554a.1 | |
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| 482 Header 97e3bf38-ee83-43d1-90ef-8e6fb5d08b25.1 | |
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| 503 # soft-masked bases 0 | |
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| 511 # soft-masked bases 0 | |
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| 514 Header a5dc244e-5f1b-4df2-9c60-cb3128e683d8.1 | |
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| 517 Base composition (ACGT) 2248, 1674, 1761, 2098 | |
| 518 GC content % 44.15 | |
| 519 # soft-masked bases 0 | |
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| 527 # soft-masked bases 0 | |
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| 535 # soft-masked bases 0 | |
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| 541 Base composition (ACGT) 3706, 2548, 2567, 3595 | |
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| 543 # soft-masked bases 0 | |
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| 546 Header b25fe5e3-6232-4fa5-9751-b719ba7b83f2.1 | |
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| 551 # soft-masked bases 0 | |
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| 554 Header fecf82d6-7a66-456e-8123-ef37e5b7c325.1 | |
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| 557 Base composition (ACGT) 1222, 1639, 1589, 1650 | |
| 558 GC content % 52.92 | |
| 559 # soft-masked bases 0 | |
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| 1648 | |
| 1649 Seq 207 | |
| 1650 Header 48f635ff-a554-4baf-b00d-04b89da3c499.1 | |
| 1651 Comment | |
| 1652 Total segment length 855 | |
| 1653 Base composition (ACGT) 304, 156, 159, 236 | |
| 1654 GC content % 36.84 | |
| 1655 # soft-masked bases 0 | |
| 1656 | |
| 1657 Seq 208 | |
| 1658 Header 88a5ba1b-a388-48d1-964c-71f836904291.1 | |
| 1659 Comment | |
| 1660 Total segment length 1435 | |
| 1661 Base composition (ACGT) 432, 231, 238, 534 | |
| 1662 GC content % 32.68 | |
| 1663 # soft-masked bases 0 | |
| 1664 | |
| 1665 Seq 209 | |
| 1666 Header 5f3b0d4d-e80b-4ec9-bc9f-8f642acef345.1 | |
| 1667 Comment | |
| 1668 Total segment length 2360 | |
| 1669 Base composition (ACGT) 852, 419, 400, 689 | |
| 1670 GC content % 34.70 | |
| 1671 # soft-masked bases 0 | |
| 1672 | |
| 1673 # scaffolds 209 | |
| 1674 Total scaffold length 1466260 | |
| 1675 Average scaffold length 7015.60 | |
| 1676 Scaffold N50 9054 | |
| 1677 Scaffold auN 9961.88 | |
| 1678 Scaffold L50 59 | |
| 1679 Largest scaffold 27298 | |
| 1680 # contigs 209 | |
| 1681 Total contig length 1466260 | |
| 1682 Average contig length 7015.60 | |
| 1683 Contig N50 9054 | |
| 1684 Contig auN 9961.88 | |
| 1685 Contig L50 59 | |
| 1686 Largest contig 27298 | |
| 1687 # gaps 0 | |
| 1688 Total gap length 0 | |
| 1689 Average gap length -nan | |
| 1690 Gap N50 0 | |
| 1691 Gap auN 0.00 | |
| 1692 Gap L50 0 | |
| 1693 Largest gap 0 | |
| 1694 Base composition (ACGT) 418269, 304935, 314298, 428758 | |
| 1695 GC content % 42.23 | |
| 1696 # soft-masked bases 0 | |
| 1697 # paths 209 |