Mercurial > repos > bgruening > glimmer_glimmer_to_gff

view test-data/glimmer.gff @ 2:891b330ffd94 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/glimmer commit 274d1f6804bfd0362fdcd2383bfdb32ca8fd634e"
author iuc
date Sun, 20 Mar 2022 10:07:15 +0000
parents 650106d2da39
children
line wrap: on
line source

##gff-version 3

gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	891	2918	.	+	.	frame=+3;score=3.28
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	144	938	.	-	.	frame=-3;score=2.86
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	4695	5606	.	+	.	frame=+3;score=0.63
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	5833	6183	.	+	.	frame=+1;score=1.21
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	7237	7368	.	-	.	frame=-1;score=1.69
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	10347	11945	.	+	.	frame=+3;score=2.93
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	12110	12238	.	-	.	frame=-2;score=4.26
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	13067	13564	.	-	.	frame=-2;score=2.78
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	13521	16529	.	+	.	frame=+3;score=3.62
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	20276	21385	.	-	.	frame=-2;score=2.90
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	21382	23037	.	-	.	frame=-1;score=2.93
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	23031	24797	.	+	.	frame=+3;score=2.92
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	27115	27291	.	-	.	frame=-1;score=8.70
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	28860	30026	.	+	.	frame=+3;score=0.20
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	32942	33151	.	-	.	frame=-2;score=3.88
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	36932	38236	.	+	.	frame=+2;score=3.00
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	34754	36949	.	-	.	frame=-2;score=2.95
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	43100	43300	.	-	.	frame=-2;score=3.03
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	46852	47445	.	-	.	frame=-1;score=2.60
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	48354	51314	.	-	.	frame=-3;score=2.96
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	55069	55290	.	-	.	frame=-1;score=3.18
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	56431	59457	.	-	.	frame=-1;score=2.96
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	59669	60169	.	+	.	frame=+2;score=3.46
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	60516	60881	.	+	.	frame=+3;score=1.56
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	60878	62821	.	+	.	frame=+2;score=2.93
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	63564	66248	.	+	.	frame=+3;score=3.14
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	62922	63596	.	-	.	frame=-3;score=2.84
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	70422	70520	.	+	.	frame=+3;score=0.07
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	75466	75654	.	+	.	frame=+1;score=2.06
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	81835	81960	.	-	.	frame=-1;score=6.45
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	87355	89982	.	+	.	frame=+1;score=2.96
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	90028	90390	.	+	.	frame=+1;score=0.39
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	91917	92009	.	+	.	frame=+3;score=1.32
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	93406	93576	.	+	.	frame=+1;score=2.94
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	93837	93998	.	+	.	frame=+3;score=1.65
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	94568	96379	.	-	.	frame=-2;score=2.94
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	99628	100467	.	+	.	frame=+1;score=3.07
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	98455	99645	.	-	.	frame=-1;score=2.91
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	100811	102931	.	+	.	frame=+2;score=2.95
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	103074	105521	.	+	.	frame=+3;score=2.96
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	105847	106200	.	-	.	frame=-1;score=1.02
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	106526	107401	.	-	.	frame=-2;score=0.12
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	108069	108365	.	-	.	frame=-3;score=3.46
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	109947	110498	.	-	.	frame=-3;score=1.27
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	110791	111060	.	-	.	frame=-1;score=1.52
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	112883	113158	.	+	.	frame=+2;score=0.43
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	115022	115660	.	-	.	frame=-2;score=1.43
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	115661	115768	.	-	.	frame=-2;score=0.06
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	115729	116553	.	-	.	frame=-1;score=0.92
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	116538	117080	.	-	.	frame=-3;score=0.58
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	118399	118857	.	-	.	frame=-1;score=2.71
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	123230	123484	.	+	.	frame=+2;score=3.73
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	123689	123925	.	+	.	frame=+2;score=4.44
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	124906	126459	.	-	.	frame=-1;score=2.93
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	126704	128992	.	-	.	frame=-2;score=2.95
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	129011	129178	.	-	.	frame=-2;score=2.06
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	130337	131737	.	-	.	frame=-2;score=2.92
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	131802	132830	.	-	.	frame=-3;score=4.65
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	134324	134983	.	+	.	frame=+2;score=0.80
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	134993	136987	.	+	.	frame=+2;score=2.94
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	137245	137523	.	-	.	frame=-1;score=3.06
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	137942	139042	.	+	.	frame=+2;score=5.32
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	139202	140140	.	+	.	frame=+2;score=5.82
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	137825	137941	.	-	.	frame=-2;score=2.04
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	140766	142487	.	-	.	frame=-3;score=2.94
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	142484	143056	.	-	.	frame=-2;score=1.32
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	143099	143545	.	-	.	frame=-2;score=2.75
gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	144230	147016	.	-	.	frame=-2;score=2.96