Mercurial > repos > bgruening > graphicsmagick_image_compare
annotate compare.xml @ 1:bb871fbe177f draft
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit 8286492ab9c949dd169e9ae1889b963ff2b7ea3a
author | bgruening |
---|---|
date | Mon, 29 Jan 2024 10:47:55 +0000 |
parents | fd0e8bda0154 |
children |
rev | line source |
---|---|
0
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
1 <tool id="graphicsmagick_image_compare" name="Compare two images" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="22.05"> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
2 <description>with GraphicsMagick</description> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
3 <macros> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
4 <import>macros.xml</import> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
5 </macros> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
6 <expand macro="requirements" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
7 <command detect_errors="aggressive"> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
8 <![CDATA[ |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
9 ln -s '${input1}' input1.${input1.ext} && |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
10 ln -s '${input2}' input2.${input2.ext} && |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
11 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
12 gm compare |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
13 -file outfile.png |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
14 -highlight-style $highlight_style |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
15 -metric $metric |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
16 -highlight-color $color |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
17 'input1.${input1.ext}' |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
18 'input2.${input2.ext}' |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
19 ]]> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
20 </command> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
21 <inputs> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
22 <param name="input1" format="jpg,png,bmp,gif,svg,eps,tiff,xcf" type="data" label="First image to compare" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
23 <param name="input2" format="jpg,png,bmp,gif,svg,eps,tiff,xcf" type="data" label="Second image to compare" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
24 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
25 <param argument="-highlight-style" type="select" label="Pixel highlight style"> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
26 <option value="assign">assign</option> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
27 <option value="threshold">threshold</option> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
28 <option value="tint">tint</option> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
29 <option value="xor">xor</option> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
30 </param> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
31 <param argument="-metric" type="select" label="Comparison metric"> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
32 <option value="MAE">MAE</option> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
33 <option value="MSE">MSE</option> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
34 <option value="PAE">PAE</option> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
35 <option value="PSNR">PSNR</option> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
36 <option value="PMSE">PMSE</option> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
37 </param> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
38 <expand macro="color" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
39 </inputs> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
40 <outputs> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
41 <data name="output" format="png" from_work_dir="outfile.png"> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
42 </data> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
43 </outputs> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
44 <tests> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
45 <test> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
46 <param name="input1" value="donald.jpg" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
47 <param name="input2" value="donald-palette.jpg" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
48 <output name="output" file="result_image_compare01.png" compare="sim_size" delta="500" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
49 </test> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
50 <test> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
51 <param name="input1" value="donald.jpg" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
52 <param name="input2" value="donald-palette.jpg" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
53 <param name="highlight_style" value="tint" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
54 <param name="metric" value="MAE" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
55 <output name="output" file="result_image_compare02.png" compare="sim_size" delta="500" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
56 </test> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
57 </tests> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
58 <help> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
59 <![CDATA[ |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
60 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
61 **What it does** |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
62 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
63 This tool compares two images and provides a diff by pixels. |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
64 Here you can see how it behaves: |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
65 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
66 Input: |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
67 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
68 .. image:: $PATH_TO_IMAGES/donald.jpg |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
69 .. image:: $PATH_TO_IMAGES/donald-palette.jpg |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
70 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
71 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
72 Output: |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
73 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
74 .. image:: $PATH_TO_IMAGES/result_image_compare01.png |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
75 |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
76 ]]> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
77 </help> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
78 <expand macro="citations" /> |
fd0e8bda0154
planemo upload for repository https://github.com/bgruening/galaxytools/new/gm/tools/image_processing/image_processing/ commit bc7f5022150a6a31030775c7aafc81293833d55a
bgruening
parents:
diff
changeset
|
79 </tool> |