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view test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt @ 0:23b8d6b8960c draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 07802a6bd441d9da888cfb8283f8c2135704f7c9
author | bgruening |
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date | Wed, 18 Oct 2023 17:07:56 +0000 |
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# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3 # This file contains the p-values computed by chi2 test # To test the smoothed (float) values they were rounded up to the next integer # # Alpha level 0.5 # Degrees of freedom 1 # # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00335 chr1 14290000 14439000 Eya1 138000 673.00000 523.00000 832.00000 645.00000 0.97540 chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.05733 chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.18635