Mercurial > repos > bgruening > hicexplorer_chicplotviewpoint
comparison test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_rejected.bed @ 1:61e2d34c5b99 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author | bgruening |
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date | Wed, 05 Feb 2020 19:55:06 -0500 |
parents | ae8bf5420df2 |
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0:ae8bf5420df2 | 1:61e2d34c5b99 |
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1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3 | 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 |
2 # This file contains the p-values computed by chi2 test | 2 # This file contains the p-values computed by chi2 test |
3 # To test the smoothed (float) values they were rounded up to the next integer | 3 # To test the smoothed (float) values they were rounded up to the next integer |
4 # | 4 # |
5 # Alpha level 0.5 | 5 # Alpha level 0.5 |
6 # Degrees of freedom 1 | 6 # Degrees of freedom 1 |
7 # | 7 # |
8 # FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0 | 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0 |
9 # MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0 | 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0 |
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value | 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value |
11 chr1 19077000 19114000 Tfap2d 20000 472.00000 344.80000 800.00000 527.80000 0.25943 | 11 chr1 19188000 19232000 Tfap2d 138000 472.00000 23.40000 800.00000 115.00000 0.00000 |
12 chr1 19125000 19129000 Tfap2d 35000 472.00000 7.80000 800.00000 8.80000 0.40802 | |
13 chr1 19141000 19238000 Tfap2d 144000 472.00000 47.40000 800.00000 163.00000 0.00004 |