Mercurial > repos > bgruening > hicexplorer_chicplotviewpoint
comparison test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.bed @ 1:61e2d34c5b99 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author | bgruening |
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date | Wed, 05 Feb 2020 19:55:06 -0500 |
parents | ae8bf5420df2 |
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0:ae8bf5420df2 | 1:61e2d34c5b99 |
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1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3 | 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 |
2 # This file contains the p-values computed by chi2 test | 2 # This file contains the p-values computed by chi2 test |
3 # To test the smoothed (float) values they were rounded up to the next integer | 3 # To test the smoothed (float) values they were rounded up to the next integer |
4 # | 4 # |
5 # Alpha level 0.5 | 5 # Alpha level 0.5 |
6 # Degrees of freedom 1 | 6 # Degrees of freedom 1 |
7 # | 7 # |
8 # FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 | 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 |
9 # MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 | 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 |
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value | 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value |
11 chr1 4472000 4503000 Sox17 15000 810.00000 566.20000 978.00000 724.40000 0.43072 | 11 chr1 4534000 4544000 Sox17 56000 810.00000 7.00000 978.00000 13.20000 0.33893 |
12 chr1 4507000 4516000 Sox17 28000 810.00000 38.80000 978.00000 19.00000 0.00105 | 12 chr1 4585000 4590000 Sox17 102000 810.00000 8.00000 978.00000 2.40000 0.04116 |
13 chr1 4520000 4531000 Sox17 43000 810.00000 10.40000 978.00000 22.20000 0.12754 | |
14 chr1 4533000 4543000 Sox17 55000 810.00000 6.80000 978.00000 12.20000 0.40725 | |
15 chr1 4562000 4593000 Sox17 105000 810.00000 25.00000 978.00000 23.20000 0.36639 | |
16 chr1 4664000 4669000 Sox17 181000 810.00000 1.20000 978.00000 5.40000 0.16231 |