Mercurial > repos > bgruening > hicexplorer_chicqualitycontrol
comparison macros.xml @ 7:fadd03fbc4f5 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit fa140a9f660eab2459e21b0b637b129d7de24c02
| author | iuc |
|---|---|
| date | Tue, 10 Jan 2023 19:10:45 +0000 |
| parents | db4a82804126 |
| children | b892fa1fcaec |
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| 6:db4a82804126 | 7:fadd03fbc4f5 |
|---|---|
| 1 <macros> | 1 <macros> |
| 2 <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token> | 2 <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token> |
| 3 <token name="@TOOL_VERSION@">3.6</token> | 3 <token name="@TOOL_VERSION@">3.6</token> |
| 4 <token name="@VERSION_SUFFIX@">0</token> | 4 <token name="@VERSION_SUFFIX@">1</token> |
| 5 <token name="@USE_RANGE@"> | 5 <token name="@USE_RANGE@"> |
| 6 #if $use_range.select_use_range == "yes_use_range": | 6 #if $use_range.select_use_range == "yes_use_range": |
| 7 --range $use_range.range_min:$use_range.range_max | 7 --range $use_range.range_min:$use_range.range_max |
| 8 #end if | 8 #end if |
| 9 </token> | 9 </token> |
| 331 <xml name="scaleFactor"> | 331 <xml name="scaleFactor"> |
| 332 <param name="scaleFactor1" type="float" value="1" label="Scale factor for treatment" help="(--scaleFactors)" /> | 332 <param name="scaleFactor1" type="float" value="1" label="Scale factor for treatment" help="(--scaleFactors)" /> |
| 333 <param name="scaleFactor2" type="float" value="1" label="Scale factor for input" help="(--scaleFactors)" /> | 333 <param name="scaleFactor2" type="float" value="1" label="Scale factor for input" help="(--scaleFactors)" /> |
| 334 </xml> | 334 </xml> |
| 335 <xml name="xMax"> | 335 <xml name="xMax"> |
| 336 <param argument="--xMax" name="xMax" type="integer" optional="true" value="" label="Max value for the x-axis in counts per bin" /> | 336 <param argument="--xMax" type="integer" optional="true" value="" label="Max value for the x-axis in counts per bin" /> |
| 337 </xml> | 337 </xml> |
| 338 <xml name="filterThreshold"> | 338 <xml name="filterThreshold"> |
| 339 <param argument="--filterThreshold" name="filterThreshold_low" type="float" value="-1.5" label="Remove bins of low coverage" help="e.g. -1.5; Both Thresholds needs to be set to take effect." /> | 339 <param argument="--filterThreshold" name="filterThreshold_low" type="float" value="-1.5" label="Remove bins of low coverage" help="e.g. -1.5; Both Thresholds needs to be set to take effect." /> |
| 340 <param argument="--filterThreshold" name="filterThreshold_large" type="float" value="5.0" label="Remove bins of large coverage" help="e.g. 5; Both Thresholds needs to be set to take effect." /> | 340 <param argument="--filterThreshold" name="filterThreshold_large" type="float" value="5.0" label="Remove bins of large coverage" help="e.g. 5; Both Thresholds needs to be set to take effect." /> |
| 341 </xml> | 341 </xml> |