comparison macros.xml @ 1:feb7f62a0ff9 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"

0:000ddd5f0f82

<macros>
    <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token>
    <token name="@WRAPPER_VERSION@">3.3.1</token>
    <token name="@USE_RANGE@">
        #if $use_range.select_use_range == "yes_use_range":
            --range $range_min:$range_max
        #end if
    </token>

    <xml name='convertFormat_single_macro'>
        <conditional name="inputFormat_conditional">
            <param name="inputFormat_selector" type="select" label="Choose input file type">
                <option value="optionCool" selected="True">cool</option>
                <option value="optionH5">h5</option>
                <!-- <option value="optionHic">hic</option> -->
                <option value="optionHomer">Homer</option>
                <option value="optionHicpro">HiCPro</option>
            </param>
            <when value="optionCool">
                <expand macro='matrix_h5_cooler_macro' />

            </when>
            <when value="optionH5">
                <expand macro='matrix_h5_cooler_macro' />
            </when>
            <!-- <when value="optionHic">
                <param name='matrixHic' type='data' format='binary' label='.hic matrix'/>
                <param name='resolutions' type='text' label='List of resolutions'/>
            </when> --> 

            <when value="optionHomer">
                <param name='matrixHomer' type='data' format='txt' label='Homer interaction matrix'/>
            </when>

1:feb7f62a0ff9

<macros>
    <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token>
    <token name="@WRAPPER_VERSION@">3.4.1</token>
    <token name="@USE_RANGE@">
        #if $use_range.select_use_range == "yes_use_range":
            --range $range_min:$range_max
        #end if
    </token>

    <xml name='convertFormat_single_macro'>
        <conditional name="inputFormat_conditional">
            <param name="inputFormat_selector" type="select" label="Choose input file type">
                <option value="optionCool" selected="True">cool</option>
                <option value="optionH5">h5</option>
                <option value="optionHic">hic</option>
                <option value="optionHomer">Homer</option>
                <option value="optionHicpro">HiCPro</option>
            </param>
            <when value="optionCool">
                <expand macro='matrix_h5_cooler_macro' />

            </when>
            <when value="optionH5">
                <expand macro='matrix_h5_cooler_macro' />
            </when>
            <when value="optionHic">
                <param name='matrixHic' type='data' format='hic' label='.hic matrix'/>
                <param name='resolutions' type='text' label='List of resolutions'/>
            </when> 

            <when value="optionHomer">
                <param name='matrixHomer' type='data' format='txt' label='Homer interaction matrix'/>
            </when>