Mercurial > repos > bgruening > hicexplorer_chicqualitycontrol

view test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.bed @ 0:000ddd5f0f82 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
author bgruening
date Mon, 16 Dec 2019 15:43:28 -0500
parents
children feb7f62a0ff9
line wrap: on
line source

# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3
# This file contains the p-values computed by fisher test
# To test the smoothed (float) values they were rounded up to the next integer
#
# Alpha level 0.5
# Degrees of freedom 1
#
# FL-E13-5_chr1.cool	chr1_14300280_14300280	14.10  Mbp	14.50  Mbp	Eya1	Sum of interactions in fixate range: 673.0
# MB-E10-5_chr1.cool	chr1_14300280_14300280	14.10  Mbp	14.50  Mbp	Eya1	Sum of interactions in fixate range: 832.0
#Chromosome	Start	End	Gene	Relative distance	sum of interactions 1	target_1 raw	sum of interactions 2	target_2 raw	p-value
chr1	14285000	14308000	Eya1	7000	673.00000	389.40000	832.00000	479.80000		0.96586
chr1	14460000	14465000	Eya1	164000	673.00000	3.20000	832.00000	7.60000		0.56425