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view test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.bed @ 1:feb7f62a0ff9 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author bgruening
date Wed, 05 Feb 2020 19:57:52 -0500
parents 000ddd5f0f82
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# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
# This file contains the p-values computed by chi2 test
# To test the smoothed (float) values they were rounded up to the next integer
#
# Alpha level 0.5
# Degrees of freedom 1
#
# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool	chr1_4487435_4487435	4.29  Mbp	4.69  Mbp	Sox17	Sum of interactions in fixate range: 810.0
# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool	chr1_4487435_4487435	4.29  Mbp	4.69  Mbp	Sox17	Sum of interactions in fixate range: 978.0
#Chromosome	Start	End	Gene	Relative distance	sum of interactions 1	target_1 raw	sum of interactions 2	target_2 raw	p-value
chr1	4534000	4544000	Sox17	56000	810.00000	7.00000	978.00000	13.20000		0.33893
chr1	4585000	4590000	Sox17	102000	810.00000	8.00000	978.00000	2.40000		0.04116